I18-Microfocus Spectroscopy
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Abstract: " This thesis considers the speciation of the transition metal iron (Fe) in hydrothermal
vent plumes. Hydrothermal inputs have recently been recognised as important in the
oceanic cycling of Fe, but understanding of the chemical forms of Fe in hydrothermal
plumes remains very limited. By considering the abundance and distribution of
various size and reactivity fractions of Fe in plumes it is possible to better constrain
the true impact that hydrothermal Fe may have on ocean biogeochemistry.
A reverse titration voltammetric technique was developed to determine Fe binding
ligands in seawater when ligands were over-saturated by high concentrations of Fe,
and Fe binding ligands and Fe size fractions were assessed in two hydrothermal
plumes in the Southern Ocean. The results indicated that at least 7.5% of total vented hydrothermal Fe was present in association with labile complexes in the plume, which may have been organic, inorganic or mixed in their nature. These
complexes would be available for transport into the deep ocean, representing an important source of bioavailable Fe to marine environments. A large portion of Fe in the plumes was in the colloidal size fraction, leading to the conclusion that weak colloidal flocculates are important in the distribution of hydrothermal Fe.
The distribution and speciation of Fe was assessed in an island arc caldera. Fe oxy-hydroxide colloids were important in this environment, suggesting that the acid rich and often shallow hydrothermal venting found at island arcs should provide Fe
as a micronutrient to surface waters. The interaction of Fe and several elements was assessed in the particulate phase in the three vent environments. Oxyanion (e.g. phosphorus) scavenging with Fe oxy-hydroxides was increased in the island
arc and sulfide dominated vent sites, suggesting that factors other than phosphate concentration, such as Fe oxidation rate, could be important in how hydrothermal Fe oxy-hydroxides interact with seawater.
"
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Sep 2013
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I18-Microfocus Spectroscopy
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Sep 2013
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I18-Microfocus Spectroscopy
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Open Access
Abstract: A detailed study into the crystal habit modification of the NaClO3 / Na2S2O6 (host /
impurity) system is presented. Ordinary morphology of NaClO3 present faces of
{001}, {110} and {111} types. The presence of impurity Na2S2O6 has led to rapid
development of new faces of
{111}
type on the NaClO3 crystals grown from
solution. Above 70ppm doping concentration, the morphology of NaClO3 crystal is
dominated by
{111}
faces. Crystal twinning occurred under 800ppm doping
concentration and above. X-ray topography was used to investigate the growth history
and defect configuration of the pure and doped crystals. Lattice distortions at various
lattice planes within the pure and doped crystals were determined using X-ray
multiple-wave diffraction (XRMD). The local structure of S2O6
2-
in NaClO3 crystal
was determined using X-ray absorption fine structure (XAFS). Molecular modelling
was applied to investigate the molecular similarity between the impurity and the host.
Strong impurity incorporation in the
{111}
sectors was revealed by X-ray
topography. The growth history of doped crystal was reconstructed and interpreted
with respect to the inhibiting effect of S2O6
2-
. Disturbance in lattice planes of doped
crystals was investigated, which was attributed to the incorporation of S2O6
2-
on
{
111
} faces. It also revealed different types of local strain on the {
111
} faces along
two different directions. The three-dimensional orientation and the actual structure of
S2O6
2-
impurity on the
{111}
faces of NaClO3 crystal were obtained. A structural
model for the impurity incorporation was established, showing good consistency with
the experimental results. In addition, the segregation coefficient of the impurity was
determined by elemental mapping, indicating strong impurity incorporation on the
{111}
faces rather than others. The incorporated S2O6
2- was concluded to be capable
of disrupting the proper packing structure of the
{111}
faces, obstructing the
generation and propagation of growth steps, and decreasing of driving force for
crystal growth.
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Sep 2013
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[7259, 8078, 8726]
Open Access
Abstract: Three areas of investigation regarding a novel class of potential anti-cancer therapeutics, triple
helicate dinuclear compounds known as ‘cylinders’, have been addressed in this work - the
synthesis of a ruthenium-based cylinder, determining the cellular localisation of the cylinders,
also determining the cellular e
↵
ects of the cylinders.
An improved protocol for the synthesis of a ruthenium cylinder has been developed, utilising
microwave synthesis as opposed to previously used reflux techniques. Whilst not leading to
an increase in yield, the synthesis is now much shorter as there is no need for the synthesis
of intermediate compound Ru(DMSO)
4
Cl
2
, and the use of Sephadex C-25 as a solid phase for
column chromatography has led to a shorter purification protocol.
First attempts at determining the cellular localisation of the fluorescent ruthenium cylin-
der have been undertaken, with confocal microscopy showing observable fluorescence within
MDA-MB-231 breast cancer cells, but not within SKOV-3 ovarian cancer cells, suggesting some
level of preferential uptake or metabolism of cylinder between cell lines. Co-localisation exper-
iments with Hoechst nuclear stains appear to show the reduction in mean fluorescence following
treatment with iron cylinder, suggesting localisation of the cylinder within cell nuclei.
Using the I-18 beamline at Diamond Light Source, synchrotron radiation has been used to
further investigate the cellular localisation of the cylinders. A sample preparation route of
growing cells on silicon nitride windows has been developed, and allowed for the imaging of
iron and nickel cylinders within SKOV-3 cells. High levels of iron are found near the cell
membrane, corresponding to areas of high calcium concentration, whereas nickel is found more
uniformly spread throughout the cell. XANES spectra of these areas show that the iron is in an
environment closer to that of the ferric iron found in ferrihydrite as opposed to the ferrous iron
found within the cylinder.
The cellular e
↵
ects of cylinder treatment have also been imaged, with the main observation
being that the motility of cells is compromised by cylinder treatment. The iron cylinder causes
the production of nitric oxide within MDA-MB-231 cells. Images taken as part of control
experiments showed low levels of fluorescence within MDA-MB-231 cells, suggesting that this
cell line does produce endogenous nitric oxide, something that has been a subject of debate
within the literature
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Sep 2013
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[585]
Abstract: Combined microfocus XAS and XRD analysis of alpha-particle radiation damage haloes around thorium-containing monazite in Fe-rich biotite reveals changes in both short- and long-range order. The total alpha-particles flux derived from the Th and U in the monazite over 1.8 Ga was 0.022 alpha particles per atomic component of the monazite and this caused increasing amounts of structural damage as the monazite emitter is approached. Short-range order disruption revealed by Fe K-edge EXAFS is manifest by a high variability in Fe-Fe bond lengths and a marked decrease in coordination number. XANES examination of the Fe K-edge shows a decrease in energy of the main absorption by up to 1 eV, revealing reduction of the Fe3+ components of the biotite by interaction with the He-4(2)2+, the result of low and thermal energy electrons produced by the cascade of electron collisions. Changes in d spacings in the XRD patterns reveal the development of polycrystallinity and new domains of damaged biotite structure with evidence of displaced atoms due to ionization interactions and nuclear collisions. The damage in biotite is considered to have been facilitated by destruction of OH groups by radiolysis and the development of Frenkel pairs causing an increase in the trioctahedral layer distances and contraction within the trioctahedral layers. The large amount of radiation damage close to the monazite can be explained by examining the electronic stopping flux.
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Aug 2013
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B22-Multimode InfraRed imaging And Microspectroscopy
I18-Microfocus Spectroscopy
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Abstract: Tuffisite veins are glass-filled fractures formed when magma fragments during degassing within the conduit. These veins form transient channels through which exsolved gases can escape from magma. The purpose of this study is to determine the extent to which chemical heterogeneity within the melt results from gas transport, and assess how this can be used to study magma degassing. Two tuffisite veins from contrasting rhyolitic eruptions at Torfajökull (Iceland) and Chaitén (Chile) were studied in detail. The tuffisite vein from Torfajökull is from a shallow dissected conduit (∼70 ka) that fed a degassed lava flow, while the sample from Chaitén was a bomb ejected during the waning phases of Plinian activity in May 2008. The results of detailed in situ chemical analyses (synchrotron XRF, FTIR, LA-ICP-MS) show that in both veins larger vesiculated fragments are enriched in volatile elements (Torfajökull: H, Li, Cl; Chaitén: Li, Cl, Cu, Zn, As, Sn, Sb) compared to the host, while the surrounding smaller particles are depleted in the Torfajökull vein (Li, Cl, Zn, Br, Rb, Pb), but enriched in the Chaitén vein (K, Cu, Zn, As, Mo, Sb, Pb). The lifespans of both veins and the fluxes of gas and particles through them can be estimated using diffusion profiles and enrichment factors. The Torfajökull vein had a longer lifespan (∼a day) and low particle velocities (∼cm/s), while the Chaitén vein was shorter lived (<1 h) with a high gas velocity (∼m/s). These differences are consistent with the contrasting eruption mechanisms (effusive vs. explosive). The amount of magma that degassed through the Chaitén vein is more than ten times the volume of the vein itself, requiring the vein to tap into pre-exsolved gas pockets. This study highlights that tuffisite veins are highly efficient gas pathways and thereby impart chemical diversity in volatile elements on the melt.
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Aug 2013
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[8058]
Abstract: Most Phanerozoic Large Igneous Provinces (LIPs) are associated in age with, and may have triggered, major mass exctinctions. This is epitomized by the synchroneity of the Central Atlantic magmatic province (CAMP; c. 201 Ma) and the Deccan Traps (c. 66 Ma) with the end-Triassic and the end-Cretaceous biotic crises, respectively. However, LIPs not associated to mass extinctions are also recorded, as in the case of the Paranà-Etendeka (PE; c. 134 Ma). Although climatic forcing caused by huge emissions of volcanic gases such as SO2 and CO2 is now accepted, precise estimates of gas contents of the basalts and their gas emission masses and rates are still poorly constrained. The differences in environmental impact of these three LIPs may reflect their different gas outputs. Here we illustrate a new approach of estimating magmatic SO2 emissions. First, the pyroxene/melt S partition coefficient coefficient was measured by micro-XRF (Diamond synchrotron, UK) and ion microprobe (WHOI, USA) onexperimentally crystallized augites and basalts. S contents were then measured by in-situ micro-XRF in augite phenocrysts from representative rocks of the three considered LIPs. Selected natural clinopyroxene crystals were verified to be devoid of fluid or sulphide inclusions through Transmission electron microscopy (TEM, Siena) thus legitimating the aplicability of the partition coefficient and the extrapolation of S burden in primitive magmas starting from S measured on augites. S in the pristine magmas ranges between 100 and 1500 ppm, consistently with results obtained by Self et al. (2008) on melt inclusions from Deccan basalts. CAMP and Deccan magmas seem systematically richer in S than PE ones, an observation that correlates well with the severity of the associated biotic crises. Thus, emissions of S (along with other volatiles) appear as important factors for assessing the global environmental changes and may play a significant role in triggering mass extinctions.
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Aug 2013
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I12-JEEP: Joint Engineering, Environmental and Processing
I18-Microfocus Spectroscopy
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Abstract: Atmospheric pitting corrosion of stainless steel was studied to determine pit growth mechanisms and kinetics. Inkjet printing of chloride was used to investigate the growth of atmospheric corrosion pits. It has been shown that the pit size increases with increasing chloride deposition density, as well as increases with increasing deposit diameter.
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Aug 2013
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I18-Microfocus Spectroscopy
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Abstract: Worldwide, breast cancer is the most frequently diagnosed cancer in women and the leading cause of cancer death among women. The concentrations of bio-metals are crucial for the homeostasis of human health and are being shown to have significantly different concentrations when comparing human cancer tissue and normal tissue
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Jul 2013
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[7525]
Abstract: Red mud leachate (pH 13) collected from Ajka, Hungary is neutralized to < pH 10 by HCl, gypsum, or seawater addition. During acid neutralization >99% Al is removed from solution during the formation of an amorphous boehmite-like precipitate and dawsonite. Minor amounts of As (24%) are also removed from solution via surface adsorption of As onto the Al oxyhydroxides. Gypsum addition to red mud leachate results in the precipitation of calcite, both in experiments and in field samples recovered from rivers treated with gypsum after the October 2010 red mud spill. Calcite precipitation results in 86% Al and 81% As removal from solution, and both are nonexchangeable with 0.1 mol L–1 phosphate solution. Contrary to As associated with neoformed Al oxyhydroxides, EXAFS analysis of the calcite precipitates revealed only isolated arsenate tetrahedra with no evidence for surface adsorption or incorporation into the calcite structure, possibly as a result of very rapid As scavenging by the calcite precipitate. Seawater neutralization also resulted in carbonate precipitation, with >99% Al and 74% As removed from solution during the formation of a poorly ordered hydrotalcite phase and via surface adsorption to the neoformed precipitates, respectively. Half the bound As could be remobilized by phosphate addition, indicating that As was weakly bound, possibly in the hydrotalcite interlayer. Only 5–16% V was removed from solution during neutralization, demonstrating a lack of interaction with any of the neoformed precipitates. High V concentrations are therefore likely to be an intractable problem during the treatment of red mud leachates.
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Jun 2013
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