I18-Microfocus Spectroscopy
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Open Access
Abstract: We have determined the chemical speciation of dissolved sulfur and the sulfur concentration at fixed oxygen and sulfur fugacities for a wide range of silicate melt compositions (from Fe-rich basalt to dacite). Each melt was equilibrated at 1300 °C and 1-atmosphere pressure at oxygen fugacities (fO2) between −1.67 and +1.6 log units relative to the Fayalite–Magnetite–Quartz (FMQ) buffer and absolute sulfur fugacities between −5.1 and −1.2 log units. The fO2 and fS2 of the experiments were controlled by using gas mixtures of CO–CO2–SO2. The speciation of sulfur in the quenched glasses was determined using both X-ray Absorption Near-Edge Spectroscopy (XANES), and from the dependence of equilibrium sulfur concentration on the fS2/fO2 ratio measured by secondary-ion mass spectrometry (SIMS) and electron microprobe.
The speciation of dissolved sulfur in each melt undergoes an abrupt transformation from S2− to S6+ with increasing fO2, and this transition is shifted ∼0.5 log units higher in fO2 as melt FeO concentration increases from ∼5 wt% to ∼18 wt%. Since sulfide concentrations at constant fO2 and fS2 are consistently greater for more FeO-rich melts, the compositional effect on speciation may be explained by the well-known sensitivity of the sulfide capacity (
CS2−
) of the melt to FeO concentration.
S6+/S2− ratios for the glasses exhibit a linear relationship with Fe3+/Fe2+, indicating that the redox couples for iron and sulfur can be directly related to one another. We used thermodynamic data to model the interrelationship between Fe and S oxidation states in terms of the equilibrium
FeS+8FeO1.5=8FeO+FeSO4
Fitting the data to our experiments at 1300 °C we obtained the following expression for the temperature-dependence of speciation:
log(S6+S2−)=8log(Fe3+Fe2+)+8.7436×106T2−27703T+20.273
This equation fits the data for all our compositions and is also consistent with earlier results at 1050 °C and 950 °C. We used the interdependence of S and Fe oxidation states to infer electron transfer between Fe2+ and S6+ during quenching of glasses from Mauna Kea, Hawaii. The effect is sufficient to cause significant overestimation of equilibrium Fe3+/ΣFe in natural glasses and corresponding overestimate of fO2 by about 0.8 log units.
Glasses equilibrated under the most oxidizing conditions (containing S6+ only) have equilibrium S concentrations that are negatively correlated with their mole fractions of tetrahedral (Si + Ti) cations.
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Feb 2019
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[12876]
Abstract: Oxygen fugacity and melt composition are both known to have a strong influence on the partitioning of trace elements between coexisting minerals and melt. Previous work has suggested that Mn partitioning between apatite and silicate melt may be strongly affected by oxygen fugacity and could, therefore, act as an oxybarometer. Here, we present a new study on the partitioning of Mn between apatite and melt at high temperature (1400–1250 °C) and 1 GPa pressure, for various melt compositions and oxygen fugacities (NNO +4.7 to NNO -10). We find that there is no demonstrable variation in the partition coefficient for Mn between apatite and silicate melt (DMnAp-m) across the range of fO2 conditions studied here. Instead, we find that DMnAp-m varies significantly with melt composition and that in particular, the proportion of non-bridging oxygens strongly influences partitioning of Mn between apatite and melt. We propose that variations in the Mn content of natural apatite, previously thought to reflect variations in fO2, are instead related to the degree of melt polymerisation. These findings are consistent with the results of Mn K-edge XANES spectroscopy, which demonstrate that Mn in coexisting apatite and silicate glass is present predominantly as Mn2+ regardless of fO2. Furthermore, XANES spectra from a series of silicate glasses synthesised at various oxygen fugacities demonstrate that Mn2+ is the predominant species, and that the average Mn oxidation state does not vary over a wide range of fO2-T conditions.
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Dec 2018
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I18-Microfocus Spectroscopy
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Abstract: It is well established that oxygen fugacity, fO₂ , is one of the key parameters that needs to be quantified in order to understand igneous processes, model the geophysical behaviour of the core and mantle, to understand the exchange of C-O-H-S gases between the atmosphere and the interior of the Earth, and to further our understanding of other terrestrial planets. Despite this it remains one of the most poorly constrained geochemical variables, limiting our understanding of terrestrial systems. Recent work has focused on using accessory minerals for determining magmatic fO₂ , as a probe to constraining conditions in planetary interiors. Accessory minerals are already important petrological tools for providing insight into magmatic conditions. These minerals may concentrate a variety of trace elements, and hence are crucial in understanding the elemental budget of magmas. Accessory minerals such as zircon and apatite are also some of the hardier minerals found in igneous rocks and are, therefore, less likely to be altered by processes such as chemical weathering, metasomatism or crustal anatexis. Furthermore, study of detrital accessory minerals in ancient sedimentary rocks could provide much needed insight into the evolution of the oxidation state of the early Earth. This work aims to assess how the compositions and structures of two accessory minerals, spinel and apatite, respond to variations in magmatic fO₂ and to determine whether these minerals could act as probes of fO₂ in planetary interiors. Focus has been concentrated on the element manganese, as (1) it is a relatively abundant trace element, (2) it can exist in valence states from Mn²⁺ to Mn⁵⁺ in nature, and (3) recent work has suggested that Mn may become preferentially concentrated in apatite under reduced conditions. In an initial investigation, large single crystals of Mn-rich spinel were synthesised under a variety of fO₂ conditions. X-ray absorption near edge structure (XANES) spectroscopy and structural refinements of single crystal X-ray diffraction data were used to determine Mn valence state and coordination. Results show that Mn is present in spinel as both Mn²⁺ and Mn³⁺, distributed over both octahedral and tetrahedral cation sites. However, in contrast to the Fe⁺²/Fe³⁺ ratio, little variation in Mn valence as a function of fO₂ was observed. Results were, however, useful in testing and refining protocols for modelling Mn XANES data in a simple, model system. In contrast to results from spinel, previous studies have indicated that Mn valence may change significantly in the accessory mineral apatite due to variations in magmatic fO₂ .
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Jul 2019
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I18-Microfocus Spectroscopy
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Abstract: The impact of long-lived radionuclides on human health depends on their behaviour in near-surface soils and sediments and the LORISE project aims to define the key controlling physical, chemical and biological processes at a number of ‘natural laboratories’ around the UK. Within this PhD project, the role of natural organic matter (NOM) is of especial importance because NOM can potentially facilitate the transport or attenuation of radiologically significant elements such as U and radiocarbon (14C). Peaty soils in the vicinity of natural uranium mineralisations are often highly enriched in U with concentrations of up to 3000 mg kg-1, 4000 mg kg-1 and 2500 mg kg-1 having been found in the US (Owen and Otten, 1995), Switzerland (Regenspurg et al., 2010), and the UK (Xu, 2013), respectively. The NOM within these soils has been implicated in U retention but the controlling processes and the nature of interactions are poorly characterised. The Needle’s Eye natural mineralisation, SW Scotland, provides a rare opportunity within the UK to investigate long-term U-NOM interactions. Similarly, the well characterised inputs of radiocarbon into the Irish Sea from the Sellafield nuclear reprocessing facility since the mid-1960s present an opportunity to investigate the transfer of anthropogenic 14C between environmental pools and trace its incorporation into coastal sediments. While the enrichment of sediment organic matter with anthropogenic 14C has been identified, (MacKenzie et al., 2004), the chemical and physical characteristics of NOM enriched with 14C have not been investigated. Currently, there is not a good understanding of which NOM components govern U binding or incorporate 14C, and therefore the implications of the influence of NOM on radionuclide mobilisation or immobilisation are hard to assess. In this study, the characteristics of organic matter from the Needle’s Eye natural analogue site have been examined and the relationship with the geochemical properties of the site and U binding have been investigated. Further to this, NOM extracted from the Needle’s Eye peat bog and from sediments of the Solway coast at the Southwick Merse has been fractionated and characterised using a range of spectroscopic techniques to identify the components of NOM which are responsible for binding U and those which incorporate anthropogenic 14C.
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Jul 2019
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[14747]
Abstract: Prostatic zinc content is a known biomarker for discriminating normal healthy tissue from benign prostatic hyperplasia (BPH) and prostate cancer (PCa). Given that zinc content is not readily measured without a tissue biopsy, we have been exploring noninvasive imaging methods to detect these diagnostic differences using a zinc-responsive MRI contrast agent. During imaging studies in mice, we observed that a bolus of glucose stimulates secretion of zinc from the prostate of fasted mice. This discovery allowed the use of a Gd-based zinc sensor to detect differential zinc secretion in regions of healthy versus malignant prostate tissue in a transgenic adenocarcinoma mouse model of PCa. Here, we used a zinc-responsive MRI agent to detect zinc release across the prostate during development of malignancy and confirm the loss of total tissue zinc by synchrotron radiation X-ray fluorescence (μSR-XRF). Quantitative μSR-XRF results show that the lateral lobe of the mouse prostate uniquely accumulates high concentrations of zinc, 1.06 ± 0.08 mM, and that the known loss of zinc content in the prostate is only observed in the lateral lobe during development of PCa. Additionally, we confirm that lesions identified by a loss of zinc secretion indeed represent malignant neoplasia and that the relative zinc concentration in the lesion is reduced to 0.370 ± 0.001 mM. The μSR-XRF data also provided insights into the mechanism of zinc secretion by showing that glucose promotes movement of zinc pools (∼1 mM) from the glandular lumen of the lateral lobe of the mouse prostate into the stromal/smooth muscle surrounding the glands. Co-localization of zinc and gadolinium in the stromal/smooth muscle areas as detected by μSR-XRF confirm that glucose initiates secretion of zinc from intracellular compartments into the extracellular spaces of the gland where it binds to the Gd-based agent and albumin promoting MR image enhancement.
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Jul 2019
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[15771]
Abstract: This research aimed to find the best phenotype of the brown algae Fucus vesiculosus (kelp) which has the greater potential to become a sorption byproduct for Zn removal from contaminated waters. Thus, the Zn uptake capacity and sorption mechanisms of the kelp collected from the Baltic Sea shore was, for the first time, investigated under various conditions, and compared to the phenotype habiting on the Irish Sea shore. Sorption studies were performed investigating the effect of algal dosage, Zn sources as well as algal harvesting time of the year on Zn uptake capacity. The results suggested that the Baltic algae is a better biosorbent for Zn uptake. Sorption mechanisms were studied by employing various indirect and direct approaches, more importantly, including high resolution synchrotron X-Ray Fluorescence and X-Ray Absorption Spectroscopy (XAS) and molecular modelling (MM). The results revealed that alginate and cellulose are among the main polysaccharide bonding Zn at algal surface, via coordination with O atoms from carboxyl and hydroxyl groups. XAS results giving direct measurements of Zn bonding environment on algal surface are supported by MM outputs and suggested that Zn is surrounded by ca. 5 O atoms at interatomic distances varying from 1.94 to 2.02 Å. The results contribute to understanding sorption mechanisms which can further lead to finding the best eluent for Zn desorption from the used biomass, bio sorbent reconditioning and reuse in multiple sorption desorption cycles as well as process optimization before industrial scaling up.
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Aug 2019
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I18-Microfocus Spectroscopy
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Open Access
Abstract: Iron sulfur (Fe–S) phases have been implicated in the emergence of life on early Earth due to their catalytic role in the synthesis of prebiotic molecules. Similarly, Fe–S phases are currently of high interest in the development of green catalysts and energy storage. Here we report the synthesis and structure of a nanoparticulate phase (FeSnano) that is a necessary solid-phase precursor to the conventionally assumed initial precipitate in the iron sulfide system, mackinawite. The structure of FeSnano contains tetrahedral iron, which is compensated by monosulfide and polysulfide sulfur species. These together dramatically affect the stability and enhance the reactivity of FeSnano.
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Aug 2018
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[8504]
Abstract: In this study, we measured the levels of elements in human brain microvascular endothelial cells (ECs) infected with T. gondii. ECs were infected with tachyzoites of the RH strain, and at 6, 24, and 48 hours post infection (hpi), the intracellular concentrations of elements were determined using a synchrotron–microfocus X-ray fluorescence microscopy (μ-XRF) system. This method enabled the quantification of the concentrations of Zn and Ca in infected and uninfected (control) ECs at sub-micron spatial resolution. T. gondii-hosting ECs contained less Zn than uninfected cells only at 48 hpi (p < 0.01). The level of Ca was not significantly different between infected and control cells (p > 0.05). Inductively Coupled Plasma Mass Spectrometry (ICP-MS) analysis revealed infection-specific metallome profiles characterized by significant increases in the intracellular levels of Zn, Fe, Mn and Cu at 48 hpi (p < 0.01), and significant reductions in the extracellular concentrations of Co, Cu, Mo, V, and Ag at 24 hpi (p < 0.05) compared with control cells. Zn constituted the largest part (74%) of the total metal composition (metallome) of the parasite. Gene expression analysis showed infection-specific upregulation in the expression of five genes, MT1JP, MT1M, MT1E, MT1F, and MT1X, belonging to the metallothionein gene family. These results point to a possible correlation between T. gondii infection and increased expression of MT1 isoforms and altered intracellular levels of elements, especially Zn and Fe. Taken together, a combined μ-XRF and ICP-MS approach is promising for studies of the role of elements in mediating host–parasite interaction.
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Sep 2018
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I18-Microfocus Spectroscopy
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Petre Flaviu
Gostin
,
Owen
Addison
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Alexander P.
Morrell
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Yue
Zhang
,
Angus J. M. C.
Cook
,
Alethea
Liens
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Mihai
Stoica
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Konstantin
Ignatyev
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Steven R.
Street
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Jing
Wu
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Yu-lung
Chiu
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Alison
Davenport
Diamond Proposal Number(s):
[13963]
Abstract: Ti‐based bulk metallic glasses are under consideration for implants due to their high yield strength and biocompatibility. In this work, in situ synchrotron X‐ray diffraction (XRD) is used to investigate the corrosion products formed from corrosion of Ti40Zr10Cu34Pd14Sn2 bulk metallic glass in artificial corrosion pits in physiological saline (NaCl). It is found that Pd nanoparticles form in the interior of the pits during electrochemical dissolution. At a low pit growth potential, the change in lattice parameter of the Pd nanoparticles is consistent with the formation of palladium hydride. In addition, a salt layer very close to the dissolving interface is found to contain CuCl, PdCl2, ZrOCl2∙8H2O, Cu, Cu2O, and several unidentified phases. The formation of Pd nanoparticles (16 ± 10 nm at 0.7 V vs Ag/AgCl) containing small amounts of the other alloying elements is confirmed by transmission electron microscopy. The addition of albumin and/or H2O2 does not significantly influence the nature of the corrosion products. When considering the biological compatibility of the alloy, the biological reactivity of the corrosion products identified should be explored.
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Sep 2018
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I18-Microfocus Spectroscopy
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Alexander
Morrell
,
J. Frederick W.
Mosselmans
,
Kalotina
Geraki
,
Konstantin
Ignatyev
,
Hiram
Castillo-michel
,
Peter
Monksfield
,
Adrian T.
Warfield
,
Maria
Febbraio
,
Helen M.
Roberts
,
Owen
Addison
,
Richard A.
Martin
Diamond Proposal Number(s):
[16458]
Abstract: Synchrotron radiation X-ray fluorescence microscopy is frequently used to investigate the spatial distribution of elements within a wide range of samples. Interrogation of heterogeneous samples that contain large concentration ranges has the potential to produce image artefacts due to the profile of the X-ray beam. The presence of these artefacts and the distribution of flux within the beam profile can significantly affect qualitative and quantitative analyses. Two distinct correction methods have been generated by referencing the beam profile itself or by employing an adaptive-thresholding procedure. Both methods significantly improve qualitative imaging by removing the artefacts without compromising the low-intensity features. The beam-profile correction method improves quantitative results but requires accurate two-dimensional characterization of the X-ray beam profile.
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Nov 2018
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