I11-High Resolution Powder Diffraction
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Diamond Proposal Number(s):
[23579]
Abstract: We present three new hybrid copper(II) chloride layered perovskites of generic composition ACuCl4 or A2CuCl4, which exhibit three distinct structure types. (m-PdH2)CuCl4 (m-PdH22+ = protonated m-phenylenediamine) adopts a Dion–Jacobson (DJ)-like layered perovskite structure type and exhibits a very large axial thermal contraction effect upon heating, as revealed via variable-temperature synchrotron X-ray powder diffraction (SXRD). This can be attributed to the contraction of an interlayer block, via a slight repositioning of the m-PdH22+ moiety. (3-AbaH)2CuCl4 (3-AbaH+ = protonated 3-aminobenzoic acid) and (4-AbaH)2CuCl4 (4-AbaH+ = protonated 4-aminobenzoic acid) possess the same generic formula as Ruddlesden–Popper (RP) layered perovskites, A2BX4, but adopt different structures. (4-AbaH)2CuCl4 adopts a near-staggered structure type, whereas (3-AbaH)2CuCl4 adopts a near-eclipsed structure type, which resembles the DJ rather than the RP family. (3-AbaH)2CuCl4 also displays static disorder of the [CuCl4]∞ layers. The crystal structures of each are discussed in terms of the differing nature of the templating molecular species, and these are compared to related layered perovskites. Preliminary magnetic measurements are reported, suggesting dominant ferromagnetic interactions.
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Jul 2021
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I19-Small Molecule Single Crystal Diffraction
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Diamond Proposal Number(s):
[22161, 18816]
Abstract: The mononuclear cobalt complex of 3,5-di-tert-butylcathecolate and cyan-pyridine (Co(diox)2(4-CN-py)2) is a very versatile compound that displays valence tautomerism (VT) in the solid state, which is induced by temperature, light, and hard X-rays, and modulated by solvent in the crystal lattice. In our work, we used single crystal X-ray diffraction as a probe for the light-induced VT in solid state and demonstrate the controlled use of hard X-rays via attenuation to avoid X-ray-induced VT interconversion. We report photoinduced VT in benzene solvated crystals of Co(diox)2(4-CN-py)2 illuminated with blue 450 nm light at 30 K with a very high yield (80%) of metastable hs-CoII states, and we also show evidence of the de-excitation of these photoinduced metastable states using red 660 nm light. Such high-yield light-induced VT had never been experimentally observed in molecular crystals of cobalt tautomers, proving that the 450 nm light illumination is triggering a chain of events that leads to the ls-CoIII to hs-CoII interconversion.
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Jun 2021
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I14-Hard X-ray Nanoprobe
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Diamond Proposal Number(s):
[19838, 20548]
Open Access
Abstract: Transition metal complexes are often prodrugs which undergo activation by ligand exchange and redox reactions before they interact with target sites. It is therefore important to understand the roles of both the metal and the ligands in their activation, especially in cells. Here we use a combination of synchrotron nanoprobe X-ray fluorescence (XRF) from Os L3M5 and Br KL3 emissions and inductively coupled plasma-mass spectrometry (ICP-MS) detection of 189Os, 79Br, and 127I, to investigate the time-dependent accumulation and localization of osmium as well as the monodentate ligand and the chelated phenylazopyridine in A2780 human ovarian cancer cells treated with the potent anticancer complexes [Os(η6-p-cymene)(4-R2-phenyl-azopyridine-5-R1)X]PF6, with R2 = NMe2 or OH, R1 = H or Br, and X = Cl or I. The data confirm that the relatively inert iodido complexes are activated rapidly in cancer cells by release of the iodido ligand, probably initiated by attack by the intracellular tripeptide glutathione (γ-L-Glu-l-Cys-Gly) on the azo double bond. The bond between osmium and the azopyridine appears to remain stable in cells for ca. 24 h, although some release of the chelated ligand is observed. Interestingly, the complexes seem to be degraded more rapidly in normal human cells, perhaps providing a possible mechanism for selective cytotoxicity towards cancer cells.
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Jun 2021
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I15-1-X-ray Pair Distribution Function (XPDF)
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Diamond Proposal Number(s):
[15959]
Open Access
Abstract: The sol–gel synthesis of iron carbide (Fe3C) nanoparticles proceeds through multiple intermediate crystalline phases, including iron oxide (FeOx) and iron nitride (Fe3N). The control of particle size is challenging, and most methods produce polydisperse Fe3C nanoparticles of 20–100 nm in diameter. Given the wide range of applications of Fe3C nanoparticles, it is essential that we understand the evolution of the system during the synthesis. Here, we report an in situ synchrotron total scattering study of the formation of Fe3C from gelatin and iron nitrate sol–gel precursors. A pair distribution function analysis reveals a dramatic increase in local ordering between 300 and 350 °C, indicating rapid nucleation and growth of iron oxide nanoparticles. The oxide intermediate remains stable until the emergence of Fe3N at 600 °C. Structural refinement of the high-temperature data revealed local distortion of the NFe6 octahedra, resulting in a change in the twist angle suggestive of a carbonitride intermediate. This work demonstrates the importance of intermediate phases in controlling the particle size of a sol–gel product. It is also, to the best of our knowledge, the first example of in situ total scattering analysis of a sol–gel system.
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May 2021
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Open Access
Abstract: Iron (Fe) is an essential trace element required for healthy brain function. Yet, disrupted iron neurochemistry, and the associated formation of aberrantly aggregated protein lesions has been implicated in the development of multiple degenerative brain disorders including Alzheimer's disease (AD). Here, nanoscale resolution soft X-ray spectromicroscopy is used to examine the interaction of β-amyloid (Aβ), a peptide fundamentally implicated in the development of Alzheimer's, and ferric (Fe3+) iron. Crucially, by probing the carbon K (280–320 eV) and iron L2,3 (700–740 eV) edges, both the organic and inorganic (iron) sample chemistry was established. The co-aggregation of Aβ and iron is known to influence iron chemistry, resulting in the chemical reduction of Fe3+ into reactive and potentially toxic ferrous (Fe2+) and zero-oxidation (Fe0) states. Here, nanoscale (i.e. sub-micron) variations in both iron oxidation state and the organic composition of Aβ were observed, replicating in vitro the diverse iron chemistry documented in amyloid plaques from human brain, with the chemical state of iron linked to the conformation state of Aβ. Furthermore, aggregates were formed that were morphologically and chemically distinct dependent on the treatment of Aβ prior to the addition of ferric iron. These findings support the hypothesis that Aβ is responsible for altering iron neurochemistry, and that this altered chemistry is a factor in neurodegenerative processes documented in AD. The methods applied here, combining nanoscale-resolution imaging and high chemical sensitivity, enabled discovery of the nanoscale heterogeneity in the iron and carbon chemistry of in vitro aggregates, and these approaches have scope for wider application in metallomics.
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Mar 2021
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B21-High Throughput SAXS
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Diamond Proposal Number(s):
[20161]
Open Access
Abstract: Iron is a fundamental element for virtually all forms of life. Despite its abundance, its bioavailability is limited, and thus, microbes developed siderophores, small molecules, which are synthesized inside the cell and then released outside for iron scavenging. Once inside the cell, iron removal does not occur spontaneously, instead this process is mediated by siderophore-interacting proteins (SIP) and/or by ferric-siderophore reductases (FSR). In the past two decades, representatives of the SIP subfamily have been structurally and biochemically characterized; however, the same was not achieved for the FSR subfamily. Here, we initiate the structural and functional characterization of FhuF, the first and only FSR ever isolated. FhuF is a globular monomeric protein mainly composed by α-helices sheltering internal cavities in a fold resembling the “palm” domain found in siderophore biosynthetic enzymes. Paramagnetic NMR spectroscopy revealed that the core of the cluster has electronic properties in line with those of previously characterized 2Fe–2S ferredoxins and differences appear to be confined to the coordination of Fe(III) in the reduced protein. In particular, the two cysteines coordinating this iron appear to have substantially different bond strengths. In similarity with the proteins from the SIP subfamily, FhuF binds both the iron-loaded and the apo forms of ferrichrome in the micromolar range and cyclic voltammetry reveals the presence of redox-Bohr effect, which broadens the range of ferric-siderophore substrates that can be thermodynamically accessible for reduction. This study suggests that despite the structural differences between FSR and SIP proteins, mechanistic similarities exist between the two classes of proteins.
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Feb 2021
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I11-High Resolution Powder Diffraction
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Abstract: Ammine metal borohydrides display extreme structural and compositional diversity and show potential applications for solid-state hydrogen and ammonia storage and as solid-state electrolytes. Thirty-two new compounds are reported in this work, and trends in the full series of ammine rare-earth-metal borohydrides are discussed. The majority of the rare-earth metals (RE) form trivalent RE(BH4)3·xNH3 (x = 7–1) compounds, which possess an intriguing crystal chemistry changing with the number of ammonia ligands, varying from structures built from complex ions (x = 5–7), to molecular structures (x = 3, 4), one-dimensional chains (x = 2), and structures built from two-dimensional layers (x = 1). Divalent RE(BH4)2·xNH3 (x = 4, 2, 1) compounds are observed for RE2+ = Sm, Eu, Yb, with structures varying from molecular structures (x = 4) to two-dimensional layered (x = 2, 1) and three-dimensional structures (Yb(BH4)2·NH3). The crystal structure and composition of the compounds depend on the volume of the rare-earth ion. In all structures, NH3 coordinates to the metal, while BH4– has a more flexible coordination and is observed as a bridging and terminal ligand and as a counterion. RE(BH4)3·xNH3 (x = 7–5, 4) releases NH3 stepwise during thermal treatment, while mainly H2 is released for x ≤ 3. In contrast, only NH3 is released from RE(BH4)2·xNH3 due to the lower charge density on the RE2+ ion and higher stability of RE(BH4)2. The thermal stability of RE(BH4)3·xNH3 increase with increasing cation charge density for x = 5, 7, while it decreases for x = 4, 6. For x = 3, the thermal stability decreases with increasing charge density, due to the destabilization of the BH4– group, making it more reactive toward NH3. This research provides a large number of novel compounds and new insight into trends in the crystal chemistry of ammine metal borohydrides and reveals a correlation between the local metal coordination and the thermal stability.
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Jan 2021
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I10-Beamline for Advanced Dichroism
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Abstract: Cobalt complexes with 2-(diisopropylphosphinomethyl)pyridine (PN) ligands have been synthesized with the aim of demonstrating electrocatalytic proton reduction to dihydrogen with a well-defined hydride complex of an Earth-abundant metal. Reactions of simple cobalt precursors with 2-(diisopropylphosphino-methyl)pyridine (PN) yield [CoII(PN)2(MeCN)][BF4]21, [CoIII(PN)2(H)(MeCN)][PF6]22, and [CoIII(PN)2(H)(Cl)][PF6] 3. Complexes 1 and 3 have been characterized crystallographically. Unusually for a bidentate PN ligand, all three exhibit geometries with mutually trans phosphorus and nitrogen ligands. Complex 1 exhibits a distorted square-pyramidal geometry with an axial MeCN ligand in a low-spin electronic state. In complexes 2 and 3, the PN ligands lie in a plane leaving the hydride trans to MeCN or chloride, respectively. The redox behavior of the three complexes has been studied by cyclic voltammetry at variable scan rates and by spectroelectrochemistry. A catalytic wave is observed in the presence of trifluoroacetic acid (TFA) at an applied potential close to the Co(II/I) couple of 1. Bulk electrolysis of 1, 2, or 3 at a potential of ca. −1.4 V vs E(Fc+/Fc) in the presence of TFA yields H2 with Faradaic yields close to 100%. A catalytic mechanism is proposed in which the pyridine moiety of a PN ligand acts as a pendant proton donor following opening of the chelate ring. Additional mechanisms may also operate, especially in the presence of high acid concentration where speciation changes.
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Dec 2020
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I11-High Resolution Powder Diffraction
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Diamond Proposal Number(s):
[25186]
Abstract: We present a structural and magnetic study of two batches of polycrystalline LiNi0.8Mn0.1Co0.1O2 (commonly known as Li NMC 811), a Ni-rich Li ion battery cathode material, using elemental analysis, X-ray and neutron diffraction, magnetometry, and polarized neutron scattering measurements. We find that the samples, labeled S1 and S2, have the composition Li1–xNi0.9+x–yMnyCo0.1O2, with x = 0.025(2), y = 0.120(2) for S1 and x = 0.002(2), y = 0.094(2) for S2, corresponding to different concentrations of magnetic ions and excess Ni2+ in the Li+ layers. Both samples show a peak in the zero-field-cooled (ZFC) dc susceptibility at 8.0(2) K, but the temperature at which the ZFC and FC (field-cooled) curves deviate is substantially different: 64(2) K for S1 and 122(2) K for S2. The ac susceptibility measurements show that the transition for S1 shifts with frequency whereas no such shift is observed for S2 within the resolution of our measurements. Our results demonstrate the sample dependence of magnetic properties in Li NMC 811, consistent with previous reports on the parent material LiNiO2. We further establish that a combination of experimental techniques is necessary to accurately determine the chemical composition of next-generation battery materials with multiple cations.
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Dec 2020
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I19-Small Molecule Single Crystal Diffraction
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Jonathan
Bould
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Kamil
Lang
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Kaplan
Kirakci
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Luis
Cerdán
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Daniel
Roca-Sanjuán
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Antonio
Francés-Monerris
,
William
Clegg
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Paul G.
Waddell
,
Marcel
Fuciman
,
Tomáš
Polívka
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Michael G. S.
Londesborough
Diamond Proposal Number(s):
[22240]
Abstract: We present the first examples of alkylated derivatives of the macropolyhedral boron hydride, anti-B18H22, which is the gain medium in the first borane laser. This new series of ten highly stable and colorless organic–inorganic hybrid clusters are capable of the conversion of UVA irradiation to blue light with fluorescence quantum yields of unity. This study gives a comprehensive description of their synthesis, isolation, and structural characterization together with a delineation of their photophysical properties using a combined theoretical and experimental approach. Treatment of anti-B18H221 with RI (where R = Me or Et) in the presence of AlCl3 gives a series of alkylated derivatives, Rx-anti-B18H22–x (where x = 2 to 6), compounds 2–6, in which the 18-vertex octadecaborane cluster architectures are preserved and yet undergo a linear “polyhedral swelling”, depending on the number of cluster alkyl substituents. The use of dichloromethane solvent in the synthetic procedure leads to dichlorination of the borane cluster and increased alkylation to give Me11-anti-B18H9Cl211, Me12-anti-B18H8Cl212, and Me13-anti-B18H7Cl213. All new alkyl derivatives are highly stable, extremely efficient (ΦF = 0.76–1.0) blue fluorophores (λems = 423–427 nm) and are soluble in a wide range of organic solvents and also a polystyrene matrix. The Et4-anti-B18H18 derivative 4b crystallizes from pentane solution in two phases with consequent multiabsorption and multiemission photophysical properties. An ultrafast transient UV–vis absorption spectroscopic study of compounds 4a and 4b reveals that an efficient excited-state absorption at the emission wavelength inhibits the laser performance of these otherwise remarkable luminescent molecules. All these new compounds add to the growing portfolio of octadecaborane-based luminescent species, and in an effort to broaden the perspective on their highly emissive photophysical properties, we highlight emerging patterns that successive substitutions have on the molecular size of the 18-vertex borane cluster structure and the distribution of the electron density within.
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Nov 2020
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