I12-JEEP: Joint Engineering, Environmental and Processing
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Diamond Proposal Number(s):
[19216]
Open Access
Abstract: This study usedhigh-speed synchrotron X-ray tomography to image the growth of Al2Cu intermetallic compoundsin 4D (3D plus time) during solidification of Al-45wt%Cu alloy. Two categories of growth patterns (basic units and dendrites) are identified. Basic unitsare elongated rods whose cross-section areL, U orhollow-rectangularshapes. The transition from L pattern to U and finally to hollow-rectangularshaped morphologywas observed. Faceted dendritic patterns include equiaxed prism and columnar dendrites. Self-repeated layer-by-layer stacking of the basic units (such as L shaped particles) is proposed as a governing mechanism for the growth of Al2Cu faceted dendrites. The growth orientation and morphologies of these patterns are strongly influenced by solidification conditions (temperature gradients, cooling rates and external magnetic fields). Another finding is that when rotating Al-45wt%Cu during upwards directional solidification,under a transverse magnetic field of 0.5T, highly refined and well aligned Al2Cu intermetallic compounds are obtained, much finer than those without the imposition of the magnetic field. This is attributed to a rotational stirring flow that modulates and regulates the temperature and solute distribution.The developed experimental findings provide a physical understanding of the formation of faceted intermetallic compounds during solidification.
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Mar 2022
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I12-JEEP: Joint Engineering, Environmental and Processing
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William Q.
Walker
,
Kylie
Cooper
,
Peter
Hughes
,
Ian
Doemling
,
Mina
Akhnoukh
,
Sydney
Taylor
,
Jacob
Darst
,
Julia
Billman
,
Matthew
Sharp
,
David
Petrushenko
,
Rhodri
Owen
,
Martin
Pham
,
Thomas
Heenan
,
Alexander
Rack
,
Oxana
Magdysyuk
,
Thomas
Connolley
,
Dan
Brett
,
Paul
Shearing
,
Donal
Finegan
,
Eric
Darcy
Diamond Proposal Number(s):
[24112, 20903, 17641]
Abstract: Consideration of thermal runaway heat output variability is paramount for the development of safe lithium-ion battery assemblies. This study utilizes data gathered from fractional thermal runaway calorimetry (FTRC) experiments to conduct a comparative analysis of thermal runaway heat output for three cell formats (18650, 21700, and 33600) as a function of trigger method (heaters, internal short-circuiting device, and nail penetration). The analysis is based on comparisons for the calculated total energy yield, fractional energy yield, heat rate, and heat flux. This study reveals that nail penetration tends to result in higher thermal runaway heat output for larger cells (21700 & 33600); these experiments also tended to result in higher fractions of the total energy being released through the cell body. The smaller cells (18650) did not appear to have significant variation in heat output as a function of trigger method. This finding suggests that, for this cell type, worst-case scenario heat output could be achievable in assembly level testing regardless of the utilized trigger method. This study also demonstrates successful translation of FTRC results, as recorded in the Battery Failure Databank, into meaningful analysis that breaks down the influence of specific conditions on thermal runaway heat output.
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Mar 2022
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I12-JEEP: Joint Engineering, Environmental and Processing
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Abstract: Zero carbon energy generation from renewable sources can reduce climate change by mitigating carbon emissions. A major challenge of renewable energy generation is the imbalance between supply and demand. To overcome the energy imbalances, subsurface storage of hydrogen in porous mediais suggested as a large-scale and economic solution, yet its mechanisms are not fully understood. Important unknowns are the effect of the high migration potential of the small and mobile hydrogen molecule and the volume of recoverable hydrogen.
We conducted non-steady state, cyclic hydrogen and brine injection experiments at 2-7 MPa and flow rates of 2-80 µl min-1 using water-wet Clashach sandstone cylinders of 4.7 mm diameter and 53-57 mm length (Clashach composition: ~96 wt.% quartz, 2% K-feldspar, 1% calcite, 1% ankerite). Two sets of experiments were performed using our new transparent flow-cell designed for x-ray computed microtomography: 1) Experiments using a laboratory x-ray source (University of Edinburgh) imaged the flow, displacement and capillary trapping of hydrogen by brine as a function of saturation after primary drainage and secondary imbibition. 2) Experiments using synchrotron radiation (Diamond Light Source, I12-JEEP tomography beamline) captured time-resolved hydrogen and brine flow and displacement processes. Pressure and mass flow measurements across the experimental apparatus complemented the microtomography volumes in both sets of experiments.
Results from a water-wet rock show that hydrogen behaves as a non-wetting phase and sits in the centre of the pore bodies, while residual brine sits in corners and pore throats. Hydrogen saturation in the pore volume is independent of the injection pressure and increases with increasing hydrogen/brine injection ratio up to ~50% saturation at 100 % hydrogen. Capillary trapping of hydrogen during brine imbibition occurs via snap off and is greatest at higher brine injection pressures, with 10 %, 12% and 21% hydrogen trapped at 2, 5 and 7 MPa, respectively. Higher brine flow rates reduce capillary trapping and increase hydrogen recovery at any given injection pressure. Based on these results, future hydrogen storage operations should inject 100% hydrogen and manage the reservoir pressure to avoid high pressures and minimize capillary trapping of hydrogen during brine reinjection.
Ongoing analysis of time-resolved experimental data will provide further insight into the critical pore-scale processes that ultimately influence the potential for geological hydrogen storage and recovery.
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Mar 2022
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I13-2-Diamond Manchester Imaging
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Diamond Proposal Number(s):
[13848, 16052]
Open Access
Abstract: Background: Understanding the diversity of eyes is crucial to unravel how different animals use vision to interact with their respective environments. To date, comparative studies of eye anatomy are scarce because they often involve time-consuming or inefficient methods. X-ray micro-tomography (micro-CT) is a promising high-throughput imaging technique that enables to reconstruct the 3D anatomy of eyes, but powerful tools are needed to perform fast conversions of anatomical reconstructions into functional eye models. Results: We developed a computing method named InSegtCone to automatically segment the crystalline cones in the apposition compound eyes of arthropods. Here, we describe the full auto-segmentation process, showcase its application to three different insect compound eyes and evaluate its performance. The auto-segmentation could successfully label the full individual shapes of 60-80% of the crystalline cones and is about as accurate and 250 times faster than manual labelling of the individual cones. Conclusions: We believe that InSegtCone can be an important tool for peer scientists to measure the orientation, size and dynamics of crystalline cones, leading to the accurate optical modelling of the diversity of arthropod eyes with micro-CT.
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Feb 2022
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I13-2-Diamond Manchester Imaging
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Fu
Sun
,
Chao
Wang
,
Markus
Osenberg
,
Kang
Dong
,
Shu
Zhang
,
Chao
Yang
,
Yantao
Wang
,
Andre
Hilger
,
Jianjun
Zhang
,
Shanmu
Dong
,
Henning
Markötter
,
Ingo
Manke
,
Guanglei
Cui
Diamond Proposal Number(s):
[18936]
Abstract: A fundamental clarification of the electro-chemo-mechanical coupling at the solid–solid electrode|electrolyte interface in all-solid-state batteries (ASSBs) is of crucial significance but has proven challenging. Herein, (synchrotron) X-ray tomography, electrochemical impedance spectroscopy (EIS), time-of-flight secondary-ion mass spectrometry (TOF-SIMS), and finite element analysis (FEA) modeling are jointly used to decouple the electro-chemo-mechanical coupling in Li10SnP2S12-based ASSBs. Non-destructive (synchrotron) X-ray tomography results visually disclose unexpected mechanical deformation of the solid electrolyte and electrode as well as an unanticipated evolving behavior of the (electro)chemically generated interphase. The EIS and TOF-SIMS probing results provide additional information that links the interphase/electrode properties to the overall battery performance. The modeling results complete the picture by providing the detailed distribution of the mechanical stress/strain and the potential/ionic flux within the electrolyte. Collectively, these results suggest that 1) the interfacial volume changes induced by the (electro)chemical reactions can trigger the mechanical deformation of the solid electrode and electrolyte; 2) the overall electrochemical process can accelerate the interfacial chemical reactions; 3) the reconfigured interfaces in turn influence the electric potential distribution as well as charge transportation within the SE. These fundamental discoveries that remain unreported until now significantly improve the understanding of the complicated electro-chemo-mechanical couplings in ASSBs.
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Feb 2022
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B24-Cryo Soft X-ray Tomography
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Hsin-Fang
Chang
,
Claudia
Schirra
,
Momchil
Ninov
,
Ulrike
Hahn
,
Keerthana
Ravichandran
,
Elmar
Krause
,
Ute
Becherer
,
Stefan
Balint
,
Maria
Harkiolaki
,
Henning
Urlaub
,
Salvatore
Valitutti
,
Cosima T.
Baldari
,
Michael L.
Dustin
,
Reinhard
Jahn
,
Jens
Rettig
Open Access
Abstract: Cytotoxic T lymphocytes (CTL) kill malignant and infected cells through the directed release of cytotoxic proteins into the immunological synapse (IS). The cytotoxic protein granzyme B (GzmB) is released in its soluble form or in supramolecular attack particles (SMAP). We utilize synaptobrevin2-mRFP knock-in mice to isolate fusogenic cytotoxic granules in an unbiased manner and visualize them alone or in degranulating CTLs. We identified two classes of fusion-competent granules, single core granules (SCG) and multi core granules (MCG), with different diameter, morphology and protein composition. Functional analyses demonstrate that both classes of granules fuse with the plasma membrane at the IS. SCG fusion releases soluble GzmB. MCGs can be labelled with the SMAP marker thrombospondin-1 and their fusion releases intact SMAPs. We propose that CTLs use SCG fusion to fill the synaptic cleft with active cytotoxic proteins instantly and parallel MCG fusion to deliver latent SMAPs for delayed killing of refractory targets.
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Feb 2022
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I13-2-Diamond Manchester Imaging
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Abstract: A critical initial phase for any beamline involves detailed characterization and commissioning tests. The development of high-brightness synchrotron laboratories around
the world has provided users with X-ray beams with ever smaller dimensions and ever
increasing fluxes. As a result, the dose that is delivered to the samples becomes an even
greater concern when the objects of study are materials of biological interest. Theoretically, for high densities of X-ray fluxes, there is a relationship between the dose (or dose rate) and induced structural damage. Dosimetric estimates are the first step in minimizing the risk of radiation damage. This work aims to contribute to the topic of dosimetry in synchrotron beams, estimating the dose rate in water from the simulation of the synchrotron X-ray spectrum for three different generations of storage rings. Direct measurement of the incident X-ray spectrum is very difficult as the differential photon flux rate is orders of magnitude greater than the capabilities of conventional detector materials and pulse height analysis hardware. Alternatively, the spectrum was estimated from a theoretical model using the SPECTRA version 11.0 program. We focus on quantities related to the X-ray beam: flux (flux density, integrated flux, etc.), beam quality, power, which are related to basic dosimetric physical quantities such as fluence, air kerma and absorbed dose by soft tissue. The proposed methodology was tested using the experimental parameters of three synchrotron sources of different generations, UVX, Elettra and Sirius, in order to estimate the dose in a biological sample. The same methodology was applied in a real experiment in which the morphology of
the tadpole Thoropa miliaris was studied using the microtomography technique in the
SYRMEP and IMX beamlines. The results obtained show the need to optimize experiments
with biological samples in order to reduce the dose delivered to the sample while maintaining the commitment to the quality of the generated image.
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Feb 2022
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Krios I-Titan Krios I at Diamond
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Diamond Proposal Number(s):
[23268, 17434]
Open Access
Abstract: The neuronal axon is packed with cytoskeletal filaments, membranes, and organelles, many of which move between the cell body and axon tip. Here, we used cryo-electron tomography to survey the internal components of mammalian sensory axons. We determined the polarity of the axonal microtubules (MTs) by combining subtomogram classification and visual inspection, finding MT plus and minus ends are structurally similar. Subtomogram averaging of globular densities in the MT lumen suggests they have a defined structure, which is surprising given they likely contain the disordered protein MAP6. We found the endoplasmic reticulum in axons is tethered to MTs through multiple short linkers. We surveyed membrane-bound cargos and describe unexpected internal features such as granules and broken membranes. In addition, we detected proteinaceous compartments, including numerous virus-like capsid particles. Our observations outline novel features of axonal cargos and MTs, providing a platform for identification of their constituents.
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Feb 2022
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B16-Test Beamline
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Diamond Proposal Number(s):
[20251]
Abstract: Microdefects in the rust layer of conventional steel and weathering steel were investigated by synchrotron X-ray micro tomography to understand the effect of defects on corrosion resistance. The rust layer of the weathering steel contained fewer and smaller defects than that of the conventional steel. A good correlation existed between the volume of defects and ion permeation of the rust layer obtained by EIS. In comparison with the conventional steel, the tomography results indicated that a protective layer formed on the weathering steel.
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Feb 2022
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Krios I-Titan Krios I at Diamond
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Diamond Proposal Number(s):
[14704]
Open Access
Abstract: Perforin is a pore-forming protein that facilitates rapid killing of pathogen-infected or cancerous cells by the immune system. Perforin is released from cytotoxic lymphocytes, together with proapoptotic granzymes, to bind to a target cell membrane where it oligomerizes and forms pores. The pores allow granzyme entry, which rapidly triggers the apoptotic death of the target cell. Here, we present a 4-Å resolution cryo–electron microscopy structure of the perforin pore, revealing previously unidentified inter- and intramolecular interactions stabilizing the assembly.
During pore formation, the helix-turn-helix motif moves away from the bend in the central beta-sheet to form an intermolecular contact. Cryo–electron tomography shows that prepores form on the membrane surface with minimal conformational changes. Our findings suggest the sequence of conformational changes underlying oligomerization and membrane insertion, and explain how several pathogenic mutations affect function.
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Feb 2022
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