I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[1175]
Abstract: The relationships between the composition of hibonite with the general formula CaAl12-2x-yMgxTi4 +xTi3 +yO19, the oxidation state of Ti (Ti3 +/ΣTi, where ΣTi = Ti3 + + Ti4 +), and oxygen fugacity (fO2) were investigated experimentally. It was found that hibonite can be synthesised with a range of Ti3 +/ΣTi values at constant fO2 and with a constant Ti3 +/ΣTi value for a range of fO2s. It was also found that if hibonite with the formula CaAl12-yTi3 +yO19 (Ti3 +/ΣTi = 1) is equilibrated with a melt of CAI composition at fO2s below the iron-wüstite buffer then the resulting hibonite contained Mg, with Mg per formula unit (pfu) ~ 0.8 Ti pfu, and Ti3 +/ΣTi ~ 0.2, irrespective of the fO2. These results suggest that the availability of Mg, rather than fO2, is the key factor that determines Ti3 +/ΣTi of hibonite. The structures of synthetic samples of hibonite with the general formula CaAl12-2xMgxTi4 +xO19, where 0 ≤ X < 1, were determined by Rietveld refinement of X-ray powder diffraction data. The predominant site occupied by Ti4 + was found to change from M2 to M4 with increasing Ti content. The range of Ti concentrations over which the site occupancy changed corresponds to that observed in meteoritic hibonite. This change in the Ti4 + site produces changes in the Ti K-edge XANES spectra, particularly in the intensity of the pre-edge feature, for constant Ti3 +/ΣTi. The observed dependence of the pre-edge on the Ti4 + site was reproduced by ab initio simulations of the XANES spectra. The XANES spectra of natural hibonite with variable Ti content from the Murchison carbonaceous chondrite closely match the spectra of the synthetic samples with similar Ti contents. These differences in the spectra of meteoritic hibonite could be misinterpreted as being due to changes in Ti3 +/ΣTi, but are instead due to differences in ΣTi, which relate to the petrogenetic history. Crystal chemistry exerts a first order control on the Ti site occupancy and Ti3 +/ΣTi value of hibonite. As a result, no simple relationship between Ti3 +/ΣTi and fO2 should be expected. It is unlikely that hibonite will be useful as an oxybarometer for solar processes without Ti3 +/ΣTi standards that are compositionally matched to the unknown.
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Apr 2017
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[9914, 18747]
Abstract: Magmatic systems are dominated by five volatiles, namely H2O, CO2, F, Cl, and S (the igneous quintet). Multiple studies have measured partitioning of four out of these five volatiles (H2O, CO2, F, and Cl) between nominally volatile-free minerals and melts, whereas the partitioning of sulfur is poorly known. To better constrain the behavior of sulfur in igneous systems we measured the partitioning of sulfur between clinopyroxene and silicate melts over a range of pressure, temperature, and melt composition from 0.8 to 1.2 GPa, 1000 to 1240 °C, and 49 to 66 wt% SiO2 (13 measurements). Additionally, we determined the crystal-melt partitioning of sulfur for plagioclase (6 measurements), orthopyroxene (2 measurements), amphibole (2 measurements), and olivine (1 measurement) in some of these same run products. Experiments were performed at high and low oxygen fugacities, where sulfur in the melt is expected to be dominantly present as an S6+ or an S2– species, respectively. When the partition coefficient is calculated as the total sulfur in the crystal divided by the total sulfur in the melt, the partition coefficient varies from 0.017 to 0.075 for clinopyroxene, from 0.036 to 0.229 for plagioclase, and is a maximum of 0.001 for olivine and of 0.003 for orthopyroxene. The variation in the total sulfur partition coefficient positively correlates with cation-oxygen bond lengths in the crystals; the measured partition coefficients increase in the order: olivine < orthopyroxene < clinopyroxene ≤ amphibole and plagioclase. At high oxygen fugacities in hydrous experiments, the clinopyroxene/melt partition coefficients for total sulfur are only approximately one-third of those measured in low oxygen fugacity, anhydrous experiments. However when the partition coefficient is calculated as total sulfur in the crystal divided by S2– in the melt, the clinopyroxene/melt partition coefficients for experiments with melts between ~51 and 66 wt% SiO2 can be described by a single mean value of 0.063 ± 0.010 (1σ standard deviation about the mean). These two observations support the hypothesis that sulfur, as S2–, replaces oxygen in the crystal structure. The results of hydrous experiments at low oxygen fugacity and anhydrous experiments at high oxygen fugacity suggest that oxygen fugacity has a greater effect on sulfur partitioning than water. Although the total sulfur clinopyroxene-melt partition coefficients are affected by the Mg/(Mg+Fe) ratio of the crystal, partition coefficients calculated using S2– in the melt display no clear dependence upon the Mg# of the clinopyroxene. Both the bulk and the S 2– partition coefficients appear unaffected by IVAl in the clinopyroxene structure. No effect of anorthite content nor of iron concentration in the crystal was seen in the data for plagioclase-melt partitioning. The data obtained for orthopyroxene and olivine were too few to establish any trends. The partition coefficients of total sulfur and S 2– between the crystals studied and silicate melts are typically lower than those of fluorine, higher than those of carbon, and similar to those of chlorine and hydrogen. These sulfur partition coefficients can be combined with analyses of volatiles in nominally volatile-free minerals and previously published partition coefficients of H2O, C, F, and Cl to constrain the concentration of the igneous quintet, the five major volatiles in magmatic systems.
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May 2020
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[9704]
Abstract: In the brain, a major contributing factor to MRI contrast between gray matter (GM) and white matter (WM) is the myelin sheath[1]. However, the paramagnetic transition metals iron (Fe) and manganese (Mn) also contribute to overall contrast. This study thus aimed to disentangle the effects of myelin, Fe, and Mn on the MR parameters T1 and T2 using control rats and mutant Shaker rats, whose brains are completely devoid of myelin (Fig. 1). We made quantitative T1 and T2 MRI measurements in vivo, and metal measurements using synchrotron radiation X-Ray fluorescence (XRF) in fresh, freeze dried sections. These measurement conditions were essential because tissue fixatives flush metals from the tissue and alter MRI relaxation
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Jun 2015
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I18-Microfocus Spectroscopy
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Abstract: Worldwide, breast cancer is the most frequently diagnosed cancer in women and the leading cause of cancer death among women. The concentrations of bio-metals are crucial for the homeostasis of human health and are being shown to have significantly different concentrations when comparing human cancer tissue and normal tissue
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Jul 2013
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[9704]
Abstract: Transition metal concentrations in the central nervous system (CNS) are implicated in neurodegenerative diseases such as Alzheimer’s, Parkinson’s and Multiple Sclerosis. A common symptom of these diseases is demyelination, which is the degradation of the myelin sheath that encapsulates the neurons in vertebrates. A dysmyelinating rodent model (Long Evans Shaker (LES) rodents) was used to characterize the transition metal concentrations in the central nervous system compared to its age-matched controls, to elucidate the contingency between transition metals and myelination in the pathogenesis of neurodegenerative diseases. The concentrations of manganese (Mn), iron (Fe), copper (Cu), and zinc (Zn) in regions of grey matter and white matter have been compared between Shaker rodents and their age-matched Long Evans (LE) controls in the cerebellum and spinal cord, using micro probe Synchrotron Radiation X-ray Fluorescence (μSRXRF).
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Sep 2015
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[9704]
Open Access
Abstract: Transition metal concentrations in the central nervous system (CNS) are altered in neurodegenerative diseases such as Alzheimer’s, Parkinson’s and multiple sclerosis. A common symptom of these diseases is demyelination, which is the degradation of the myelin sheath that encapsulates the neurons in vertebrates. Transition metal concentrations were measured in Long Evans Shaker (LES) rodent model and compared to healthy age-matched controls to investigate the relationship between transition metals and myelination. Micro probe Synchrotron Radiation X-ray Fluorescence (µSRXRF) was used to measure concentrations of manganese (Mn), iron (Fe), copper (Cu), and zinc (Zn) in regions of grey matter and white matter in Shaker rodents and their age-matched Long Evans (LE) controls in the cerebellum and spinal cord. In the cerebellum, the concentrations of all elements were significantly increased in the white matter of the Shaker model, and decreased in the gray matter of the Shaker model in comparison to their age and region matched controls. In the spinal cord samples, concentrations of all metals were higher in white matter and grey matter of Shaker rat spinal cord compared to those in the control rat spinal cord. This study demonstrated that the sensitivity of µSRXRF is sufficient to discriminate between the elemental distributions of gray and white matter of the brain sections and spinal cords in the two groups. The observed significant increase of Mn, Fe, Zn and Cu in the white matter of the Shaker animals in the cerebellum and spinal cord compared to controls could be the result of astrocytic glial cells replacing the myelin in the CNS. Unlike other imaging techniques, the fine resolution of µSRXRF enables specific regions of gray matter structures namely, the molecular layer and the granule layer to be identified in the rat CNS, and their transition metal concentrations to be quantified. This work will further establish µSRXRF as a powerful analytic technique for compositional studies in brain sections from models of brain disease.
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Sep 2016
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[6303]
Abstract: Tris(8-quinolinolato)gallium(III) (1, KP46) is a very promising investigational anticancer drug. Its interaction with serum proteins, elemental distribution, and coordination in tissue were investigated with X-ray absorption (XAS) methods. Model compounds with mixed O, N, and/or S donor atoms are reported. The coordination and structure of 1 in cell culture medium (minimum essential medium, MEM) and fetal calf serum (FCS) were probed by XANES and EXAFS. The interaction of 1 with the serum proteins apotransferrin (apoTf) and human serum albumin (HSA) was addressed as well. By application of micro-XAS to tissue samples from mice treated with 1, the gallium distribution pattern was analyzed and compared to those of physiological trace elements. The complex 1 turned out to be very stable under physiological conditions, in cell culture media and in tissue samples. The coordination environment of the metal center remains intact in the presence of apoTf and HSA. The gallium distribution pattern in tumor and liver tissue revealed high similarities to the distribution patterns of Zn and Fe, minor similarities to Cu and Ni, and no similarity to Ca.
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Jun 2012
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I18-Microfocus Spectroscopy
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Open Access
Abstract: Purpose : The purpose of this study was to investigate the distribution of Ca, Fe and Zn using X-ray fluorescence in human RPE/Bruch’s membrane/choroid with and without early AMD.
Methods : We used a set of unfixed frozen human retinal pigment epithelium (RPE)/choroid samples from young (n=1, female aged 34) and aged donors with (n=4, males, aged 73-78) and without (n=3, one female, aged 75-77) early AMD from Manchester Eye Tissue Repository. Using X-ray fluorescence microscopy (I18 Diamond light source, UK) with a 2 um beam, we obtained high-resolution Ca, Zn, Fe, sulphur, potassium, chloride and phosphorus maps covering areas up to 100 x 600 um2 of 30 um thick sections placed on quartz holders and scanned at room temperature
Results : Calcification was observed in the 3 groups. In the 34-year old sample, sparse small Ca spherules (2x2 um2) at the RPE/Bruch’s membrane interface not colocalising with Zn or Fe. In aged samples, with and without AMD, calcified nodules within RPE cells, at RPE/Bruch’s membrane interface and within druse in AMD. Every calcified nodule colocalised with Zn. Quantification revealed two types (high Zn content, low Zn content). In aged donors without AMD, high-Zn calcified nodules with Ca concentration of 3083+1679 ppm (mean+SD) (maximum 12809+9311) and Zn 66+55 ppm (max 125+75). The average size was 27+15 um2. In aged samples with AMD, high-Zn calcified nodules with average Ca concentration of 4316+1723 ppm (max 13105+7563) and Zn 97+57 ppm (max 201+143). Size 26x10 um2. In the aged non-AMD group, the low zinc-calcification nodules contained an average Ca ppm of 915+259 (max 1475+380) and Zn 33+18 ppm (max 40+21). The average size 28x16 um2. In the AMD group, the low Zn calcified nodules average Ca ppm 1544+1450 (max 3526+5289) and average Zn ppm 47+23 (max 64+37). Average size 19x10 um2. Calcified plaques in Bruch’s membrane from aged donors with and without AMD. Some of these plaques colocalised with Zn and also Fe. Fe-loaded structures in the choriocapillaris underlying calcified nodules and plaques.
Conclusions : Calcific nodules contain zinc in older eyes with and without AMD. Calcified nodules with lower amounts of Ca contained lower amounts of Zn, so the accumulation of Ca may occur in parallel to Zn. It is possible that iron-loaded structures in the choriocapillaris are macrophages.
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Jun 2020
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I18-Microfocus Spectroscopy
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Open Access
Abstract: Neoplastic and healthy brain tissues were analysed to discern the changes in the spatial distribution and overall concentration of elements using micro X-ray fluorescence spectroscopy. High-resolution distribution maps of minor and trace elements such as P, S, Cl, K, Ca, Fe, Cu and Zn made it possible to distinguish between homogeneous cancerous tissue and areas where some structures could be identified, such as blood vessels and calcifications. Concentrations of the elements in the selected homogeneous areas of brain tissue were compared between tumours with various malignancy grades and with the controls. The study showed a decrease in the average concentration of Fe, P, S and Ca in tissues with high grades of malignancy as compared to the control group, whereas the concentration of Zn in these tissues was increased. The changes in the concentration were found to be correlated with the tumour malignancy grade. The efficacy of micro X-ray fluorescence spectroscopy to distinguish between various types of cancer based on the concentrations of studied elements was confirmed by multivariate discriminant analysis. Our analysis showed that the most important elements for tissue classification are Cu, K, Fe, Ca, and Zn. This method made it possible to correctly classify histopathological types in 99.93% of the cases used to build the model and in as much as 99.16% of new cases
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Dec 2015
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I18-Microfocus Spectroscopy
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Abstract: Zinc is known to play an important role in many cellular processes, and the levels of zinc are controlled by specific transporters from the ZIP (SLC39A) influx transporter group and the ZnT (SLC30A) efflux transporter group. The distribution of zinc was measured in 59 samples of invasive ductal carcinoma of breast using synchrotron radiation micro probe x-ray fluorescence facilities. The samples were formalin fixed paraffin embedded tissue micro arrays (TMAs) enabling a high throughput of samples and allowing us to correlate the distribution of trace metals with tumour cell distribution and, for the first time, important biological variables. The samples were divided into two classes, 34 oestrogen receptor positive (ER+ve) and 25 oestrogen receptor negative (ER-ve) based on quantitative immunohistochemistry assessment. The overall levels of zinc (i.e. in tumour and surrounding tissue) in the ER+ve samples were on average 60% higher than those in the ER-ve samples. The zinc levels were higher in the ER+ve tumour areas compared to the ER-ve tumour areas with the mean levels in the ER+ve samples being approximately 80% higher than the mean ER-ve levels. However, the non-tumour tissue regions of the samples contained on average the same levels of zinc in both types of breast cancers. The relative levels of zinc in tumour areas of the tissue were compared with levels in areas of non-tumour surrounding tissue. There was a significant increase in zinc in the tumour regions of the ER+ve samples compared to the surrounding regions (P < 0.001) and a non-significant increase in the ER-ve samples. When comparing the increase in zinc in the tumour regions expressed as a percentage of the surrounding non-tumour tissue zinc level in the same sample, a significant difference between the ER+ve and ER-ve samples was found (P < 0.01).
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Jun 2009
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