I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[8861]
Open Access
Abstract: With the advent of high-throughput and imaging core level spectroscopies (including X-ray absorption spectroscopy, XAS, as well as electron energy loss spectroscopy, EELS), automated data processing, visualisation and analytics will become a necessity. As a first step towards these objectives we examined the possibilities and limitations of a simple automated XANES peak fitting procedure written in MATLAB, for the parametrisation of XANES features, including ionisation potentials as well as the energies and intensities of electronic transitions. Using a series of Au L3-edge XANES reference spectra we show that most of the relevant information can be captured through a small number of rules applied to constrain the fits. Uncertainty in this strategy arises mostly when the ionisation potential (IP) overlaps with weak electronic transitions or features in the continuum beyond the IP, which can result in ambiguity through multiple equally good fits.
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May 2016
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[9574]
Abstract: Relevant mineral fibres of social and economic importance (chrysotile UICC, crocidolite UICC and a
fibrous erionite from Jersey, Nevada, USA) were put in contact with cultured diploid human nontumorigenic bronchial epithelial (Beas2B) and pleural transformed mesothelial (MeT5A) cells to test
their cytotoxicity. Slides of each sample at different contact times up to 96 h were studied in situ using
synchrotron XRF, m-XRD and m-XAS (I18 beamline, Diamond Light Source, UK) and TEM investigations.
XRF maps of samples treated for 96 h evidenced that iron is still present within the chrysotile and
crocidolite fibres and retained at the surface of the erionite fibres, indicating its null to minor mobilization in contact with cell media; this picture was confirmed by the results of XANES pre-edge analyses.
m-XRD and TEM data indicate greater morphological and crystallinity modifications occurring in
chrysotile, whereas crocidolite and erionite show to be resistant in the biological environment. The
contact of chrysotile with the cell cultures seems to lead to earlier amorphization, interpreted as the first
dissolution step of these fibres. The formation of such silica-rich fibre skeleton may prompt the production of HO in synergy with surface iron species and could indicate that chrysotile may be much more
reactive and cytotoxic in vitro in the (very) short term whereas the activity of crocidolite and erionite
would be much more sluggish but persistent in the long term.
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Dec 2016
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[12907]
Abstract: The complex tribochemical nature of lubricated tribological contacts is inaccessible in real
time without altering their initial state. To overcome this issue, a new design of a pin-ondisc
tribological apparatus was developed and combined with synchrotron X-ray absorption
spectroscopy (XAS). Using the designed apparatus it is possible to study in-situ the transient
decomposition reactions of various oil additives on different surfaces under a wide range of
realistic operating conditions of contact pressure (1.0 - 3.0 GPa), temperature (25 - 120
oC) and sliding speed (30 - 3000 rpm or 0.15 - 15 m/s). To test the apparatus, several
tribological tests were performed at different shearing times ranging from 2.5 to 60 minutes.
These tests were carried out under Helium atmosphere at a temperature of 80 oC, contact
pressure of 2.2 GPa and sliding speed of 50 rpm. The XAS experiments showed that the zinc
dialkyldithiophosphate (ZDDP) antiwear additive decomposes in the oil to form a tribofilm
on the iron surface at different reaction kinetics from the ones of the thermal film. This
confirmed the findings of several previous studies that the formation of the tribofilm is a
thermally activated mechanically assisted process, which is faster than the one involved the
thermal film that is only thermally activated. Furthermore, the results indicated that the
sulfur of the formed film, whether a tribofilm or a thermal film, appears initially in the form
of sulfate, with some sulfide, which under heat or shear is reduced into mainly sulfide.
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Jan 2017
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[12583]
Open Access
Abstract: Background
Concerns have been expressed that inhaled nanoparticles may behave differently to larger particles in terms of lung clearance and translocation, with potential implications for their toxicity. Studies undertaken to investigate this have typically involved limited post-exposure periods. There is a shortage of information on longer-term clearance and translocation patterns and their dependence on particle size, which this study aimed to address.
Methods
Rats were exposed (<3 h) nose-only to aerosols of spark-generated radioactive iridium-192 nanoparticles of four sizes: 10 nm, 15 nm, 35 nm and 75 nm (count median diameter) (aerosol mass concentrations 17, 140, 430, and 690 μg/m3, respectively). The content of iridium-192 in the whole animal, organs, tissues, and excreta was measured at various times post-exposure to ≥ 1 month. Limited toxicological investigations were undertaken for the 10 nm aerosol using bronchoalveolar lavage fluid. Elemental maps of tissue samples were produced using laser ablation inductively coupled plasma mass spectrometry and synchrotron micro-focus x-ray fluorescence. The chemical speciation of the iridium was explored using synchrotron micro focus x-ray near-edge absorption spectroscopy.
Results
Long-term lung retention half-times of several hundred days were found, which were not dependent on particle size. There was significant variation between individual animals. Analysis of bronchoalveolar lavage fluid for the 10 nm aerosol indicated a limited inflammatory response resolving within the first 7 days. Low levels of, particle size dependent, translocation to the kidney and liver were found (maximum 0.4% of the lung content). Any translocation to the brain was below the limits of detection (i.e. < 0.01% of the lung content). The kidney content increased to approximately 30 days and then remained broadly constant or decreased, whereas the content in the liver increased throughout the study. Laser ablation inductively coupled plasma mass spectrometry analysis indicated homogeneous iridium distribution in the liver and within the cortex in the kidney.
Conclusions
Slow lung clearance and a pattern of temporally increasing concentrations in key secondary target organs has been demonstrated for inhaled iridium aerosol particles < 100 nm, which may have implications for long-term toxicity, especially in the context of chronic exposures.
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Feb 2017
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[11892, 13852]
Open Access
Abstract: Metal accumulation in seeds is a prerequisite for germination and establishment of plants but also for micronutrient delivery to humans. To investigate metal transport processes and their interactions in seeds, we focused on METAL TOLERANCE PROTEIN 8 (MTP8), a tonoplast transporter of the Mn subclade of cation diffusion facilitators, which in Arabidopsis thaliana is expressed in embryos of seeds. X-ray fluorescence imaging showed that expression of MTP8 was responsible for Mn localization in subepidermal cells on the abaxial side of the cotyledons and in cortical cells of the hypocotyl. Accordingly, under low Mn availability MTP8 increased seed stores of Mn, required for efficient seed germination. In mutant embryos lacking expression of VACUOLAR IRON TRANSPORTER (VIT1), MTP8 built up Fe hotspots in MTP8-expressing cells types, suggesting that MTP8 transports Fe in addition to Mn. In mtp8 vit1 double mutant seeds, Mn and Fe were distributed in all cell types of the embryo. An Fe transport function of MTP8 was confirmed by its ability to complement Fe hypersensitivity of a yeast mutant defective in vacuolar Fe transport. Imbibing mtp8-1 mutant seeds in the presence of Mn or subjecting seeds to wet-dry cycles showed that MTP8 conferred Mn tolerance. During germination, MTP8 promoted re-allocation of Fe from the vasculature. These results indicate that cell type-specific accumulation of Mn and Fe in seeds depends on MTP8 and that this transporter plays an important role in the generation of seed metal stores as well as for metal homeostasis and germination efficiency under challenging environmental conditions.
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May 2017
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[13025]
Open Access
Abstract: Crystalline silicon optical fibers are emerging as a promising platform for a wide range of optoelectronic applications. Here we report a crystallographic study of the material properties within silicon fibers that have been post-processed via a tapering procedure to obtain small, few micron-sized core diameters. Our results reveal that the tapering process can improve the polysilicon quality of the core through the formation of large, centimeter long crystal grains, thus significantly reducing the optical losses.
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May 2017
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[15947]
Abstract: Two flow-through experiments were conducted to assess serpentinization of intact dunite cores. Permeability and fluid chemistry indicate significantly more reaction during the second experiment at 200°C than the first experiment at 150°C. Permeability decreased by a factor of 2.4 and 25 during the experiments at 150 and 200°C, respectively. Furthermore, hydrogen and methane concentrations exceeded 600 µmol/kg and 300 µmol/kg during the 200°C experiment, and were one and two orders of magnitude higher, respectively, than the 150°C experiment. Fe K-edge X-ray absorption near edge structure analyses of alteration minerals demonstrated Fe oxidation that occurred during the 200°C experiment. Vibrating sample magnetometer measurements on post-experimental cores indicated little to no magnetite production, suggesting that the hydrogen was largely generated by the oxidation of iron as olivine was converted to ferric iron (Fe(III)) serpentine and/or saponite. Scanning electron microscopy images suggested secondary mineralization on the post-experimental core from the 200°C experiment, portraying the formation of a secondary phase with a honeycomb-like texture as well as calcite and wollastonite. Scanning electron microscopy images also illustrated dissolution along linear bands through the interiors of olivine crystals, possibly along pathways with abundant fluid inclusions. Energy dispersive X-ray spectroscopy identified Cl uptake in serpentine, while Fourier transform-infrared spectroscopy suggested the formation of serpentine, saponite, and talc. However, no change was observed when comparing pre- and post-experimental X-ray computed tomography scans of the cores. Furthermore, (ultra) small angle neutron scattering datasets were collected to assess changes in porosity, surface area, and fractal characteristics of the samples over the ≈ 1 nm- to 10 µm-scale range. The results from the 200°C post-experimental core generally fell within the range of values for the two pristine samples and the 150°C post-experimental core that underwent negligible reaction, indicating that any change from reaction was smaller than the natural variability of the dunite. Even though there was little physical evidence of alteration, the initial stage of serpentinization at 200°C was sufficiently significant to have a dramatic effect on flow fields in the core. Furthermore, this experiment generated significant dissolved hydrogen concentrations, while simulating open system dynamics. Even though open systems prevent elevated hydrogen concentrations due to continual loss of hydrogen, we speculate that this process is responsible for stabilizing ferric Fe-rich serpentine in nature, while also oxidizing more ferrous Fe (Fe(II)) iron and cumulatively generating more hydrogen than would be possible in a closed system.
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Jul 2017
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[13616]
Abstract: The whelk Buccinum undatum is commercially important in the North Atlantic. However, monitoring the ontogenetic age and growth of populations has been problematic for fisheries scientists owing to the lack of a robust age determination method. We confirmed the annual periodicity of growth rings present in calcified statoliths located in the foot of field-collected and laboratory reared whelks using microscale measurements of trace element geochemistry. Using Secondary Ion Mass Spectrometry (SIMS), annual trace element profiles were quantified at 2 μm resolution in statoliths removed from whelks collected alive from three locations spanning the length of the UK; the Shetland Isles (North), the Menai Strait, North Wales (Mid) and Jersey (South). Clear cycles in the Mg/Ca ratio were apparent with minimum values corresponding with the visible dark statolith rings and comparatively higher ratios displayed in the first year of growth. Statoliths from one and two-year-old laboratory reared whelks of known age and life history contained one and two Mg/Ca cycles respectively and demonstrated that the statolith growth ring is formed during winter (February and March). Cycles of Na/Ca were found to be anti-correlated to Mg/Ca cycles, whilst ratios of Sr/Ca were inconsistent and showed an apparent ontogenetic increase, suggesting strong physiological control. Variability in elemental data will likely limit the usefulness of these structures as environmental recorders. The results obtained using SIMS for trace element analysis of statoliths confirms the robustness of the statolith rings in estimating whelk age. μXRD at 2 μm spatial resolution demonstrated the statoliths were wholly aragonitic and thus trace element variation was not the result of possible differences in CaCO3 polymorph within the statolith. Changing XRD patterns along with SEM imaging also reveal an ‘hourglass’ microstructure within each statolith. The validation of the annual periodicity of statolith growth rings now provides a robust and novel age determination technique that will lead to improved management of B. undatum stocks.
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Sep 2017
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[13963]
Open Access
Abstract: Corrosion products generated in artificial pits of zirconium were characterized in–situ by synchrotron X-ray diffraction and X-ray absorption near edge structure (XANES) in physiological saline, with and without addition of 4% albumin and/or 0.1% H2O2. Zr metal fragments and tetragonal ZrO2 particles were detected in aggregated black corrosion products away from the corrosion front. At the corrosion front, a ZrOCl2⋅8H2O salt layer of a few hundreds of microns thickness was formed. Coarsened ZrOCl2⋅8H2O crystallites were found farther out into the solution. The Zr solution species were confirmed to be in a tetravalent state by XANES. TEM imaging of the corrosion products revealed heterogeneity of the morphology of the Zr metal fragments and confirmed their size to be less than a few microns. The formation and speciation of Zr corrosion products were found not affected by the presence of H2O2 and/or albumin in physiological saline. Furthermore, bulk Zr electrochemistry identified that the presence of H2O2 and/or albumin did not affect passive current densities and pitting potentials of the bulk Zr surface. Therefore, it is concluded that the pitting susceptibility and pit chemistry of Zr in physiological saline were unaffected by the presence of H2O2, albumin or their combinations.
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Dec 2017
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[12505]
Abstract: Stainless steel coupons have been exposed to uranium-containing nitric acid solutions, in conditions similar to those found in various uranium handling nuclear facilities across the nuclear fuel cycle. Solid state analysis of the stainless steel samples and solution composition analysis were undertaken to gain a better understanding of the contamination process mechanisms. Stainless steel coupons were immersed in 12 M HNO3 containing uranium (1 g/L), in the form of uranyl, for periods of up to 255 days. Uranium contamination was observed across all time lengths of exposure. Solution analysis indicated that the levels of contamination reached an equilibrium state after ~14 days. Investigations using Raman microscopy, synchrotron microfocus X-ray fluorescence and X-ray absorption spectroscopy showed inhomogeneous localization of uranyl species within the passive layer of the stainless steel surface. Over longer time lengths of exposure these contaminant species were predominantly found to locate within intergranular regions of the stainless steel. This finding should be taken into consideration when developing decontamination protocols for corroded stainless steel that has been exposed to uranium, to facilitate metal reuse/recycle and minimize hazardous waste volumes.
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Feb 2018
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