I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[14910, 16067]
Open Access
Abstract: Nakhlites are martian pyroxenites that crystallized in a shallow intrusion or lava flow(s) during
the Amazonian period, ~1.3 Ga [1]. They host amorphous and/or nanocrystalline hydrous Fe,Mg-silicates and a
range of salt minerals that clearly formed via water-rock interactions in the subsurface of Mars [e.g., 2,3,4] as recently
as ~680 Ma [5]. The nature of the aqueous event(s) that triggered the alterations, especially the mechanisms
by which the secondary minerals formed are, however, not fully recognized. The most comprehensive model suggests
that all the secondary minerals were formed by a single episodic event and were deposited from a brine that
was derived from a low-T hydrothermal source [6]. Trace element signatures of some alteration minerals [3] may in
turn suggest evaporation of a surface derived brine such as flood waters. Nanostructural studies [4] instead reveal
that carbonates may have formed by serpentinization and carbonation of olivine via reaction with atmosphericderived
gas. The majority of interpretations are, however, based mainly on the observation of Fe,Mg-silicates, while
the salt minerals, and especially their textures, have been studied far less. Our study is concerned with the reconstruction
of fluid flow(s) and alteration/replacement histories recorded by the salt minerals in nakhlites. We focus on
their chemical and textural relationships to the primary minerals, each other, the hydrous Fe,Mg-silicates and the
fracture systems. Moreover, we have undertaken this study with no (or minimal) invasive or destructive sampling.
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Jul 2017
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[1175]
Abstract: The relationships between the composition of hibonite with the general formula CaAl12-2x-yMgxTi4 +xTi3 +yO19, the oxidation state of Ti (Ti3 +/ΣTi, where ΣTi = Ti3 + + Ti4 +), and oxygen fugacity (fO2) were investigated experimentally. It was found that hibonite can be synthesised with a range of Ti3 +/ΣTi values at constant fO2 and with a constant Ti3 +/ΣTi value for a range of fO2s. It was also found that if hibonite with the formula CaAl12-yTi3 +yO19 (Ti3 +/ΣTi = 1) is equilibrated with a melt of CAI composition at fO2s below the iron-wüstite buffer then the resulting hibonite contained Mg, with Mg per formula unit (pfu) ~ 0.8 Ti pfu, and Ti3 +/ΣTi ~ 0.2, irrespective of the fO2. These results suggest that the availability of Mg, rather than fO2, is the key factor that determines Ti3 +/ΣTi of hibonite. The structures of synthetic samples of hibonite with the general formula CaAl12-2xMgxTi4 +xO19, where 0 ≤ X < 1, were determined by Rietveld refinement of X-ray powder diffraction data. The predominant site occupied by Ti4 + was found to change from M2 to M4 with increasing Ti content. The range of Ti concentrations over which the site occupancy changed corresponds to that observed in meteoritic hibonite. This change in the Ti4 + site produces changes in the Ti K-edge XANES spectra, particularly in the intensity of the pre-edge feature, for constant Ti3 +/ΣTi. The observed dependence of the pre-edge on the Ti4 + site was reproduced by ab initio simulations of the XANES spectra. The XANES spectra of natural hibonite with variable Ti content from the Murchison carbonaceous chondrite closely match the spectra of the synthetic samples with similar Ti contents. These differences in the spectra of meteoritic hibonite could be misinterpreted as being due to changes in Ti3 +/ΣTi, but are instead due to differences in ΣTi, which relate to the petrogenetic history. Crystal chemistry exerts a first order control on the Ti site occupancy and Ti3 +/ΣTi value of hibonite. As a result, no simple relationship between Ti3 +/ΣTi and fO2 should be expected. It is unlikely that hibonite will be useful as an oxybarometer for solar processes without Ti3 +/ΣTi standards that are compositionally matched to the unknown.
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Apr 2017
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I18-Microfocus Spectroscopy
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Anita
Cadoux
,
Giada
Iacono-marziano
,
Antonio
Paonita
,
Etienne
Deloule
,
Alessandro
Aiuppa
,
G.
Nelson Eby
,
Michela
Costa
,
Lorenzo
Brusca
,
Kim
Berlo
,
Kaltina
Geraki
,
Tamsin A.
Mather
,
David M.
Pyle
,
Ida
Di Carlo
Diamond Proposal Number(s):
[8797]
Abstract: Measuring the low bromine abundances in Earth’s materials remains an important challenge in order to constrain the geodynamical cycle of this element. Suitable standard materials are therefore required to establish reliable analytical methods to quantify Br abundances. In this study we characterise 21 Br-doped glasses synthesized from natural volcanic rocks of mafic to silicic compositions, in order to produce a new set of standards for Br analyses using various techniques. The nominal Br contents (amounts of Br loaded in the experimental samples) of 15 of 21 glasses were confirmed within 20% by instrumental neutron activation analysis (INAA). Using this new set of standards, we compare three micro-analytical approaches to measure Br contents in silicate glasses: synchrotron X-ray fluorescence (SR-XRF), laser ablation-inductively coupled plasma mass spectrometry (LA-ICP-MS), and secondary ion mass spectrometry (SIMS). With SR-XRF, the Br contents of the standard glasses were determined with the highest accuracy (< 10% for Br ≥ 10 ppm; > 25% for Br ≤ 5 ppm), and high precision (< 10% for Br contents > 10 ppm; 20-30% for Br ≤ 10 ppm). The detection limit was estimated to be less than 1 ppm Br. All those factors combined with a high spatial resolution (5x5 μm for the presented measurements), means that SR-XRF is well suited to determine the low Br abundance in natural volcanic glasses (crystal-hosted melt inclusions or matrix glasses of crystallized samples). At its current stage of development, the LA-ICP-MS method allows the measurement of hundreds to thousands ppm Br in silicate glasses with a precision and accuracy generally within 20 %. The Br detection limit of this method has not been estimated but its low spatial resolution (90 μm) currently prevents its use to characterise natural volcanic glasses, however it is fully appropriate to analyse super liquidus or sparsely phyric, Br-rich experimental charges. Our study shows that SIMS appears to be a promising technique to measure the low Br contents of natural volcanic glasses. Its spatial resolution is relatively good (~ 15 μm) and, similarly to SR-XRF, the detection limit is estimated to be ≤ 1 ppm. Using our new set of standards, the Br contents of two MPI-DING reference glasses containing less than 1.2 ppm of Br were reproduced with precision < 5% and accuracy < 20%. Moreover, SIMS presents the advantage of being a more accessible instrument than SR-XRF and data processing is more straightforward.
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Feb 2017
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I18-Microfocus Spectroscopy
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Christopher J.
Serpell
,
Reida N.
Rutte
,
Kalotina
Geraki
,
Elzbieta
Pach
,
Markus
Martincic
,
Magdalena
Kierkowicz
,
Sonia
De Munari
,
Kim
Wals
,
Ritu
Raj
,
Belen
Ballesteros
,
Gerard
Tobias
,
Daniel C.
Anthony
,
Benjamin G.
Davis
Diamond Proposal Number(s):
[11203]
Open Access
Abstract: The desire to study biology in situ has been aided by many imaging techniques. Among these, X-ray fluorescence (XRF) mapping permits observation of elemental distributions in a multichannel manner. However, XRF imaging is underused, in part, because of the difficulty in interpreting maps without an underlying cellular ‘blueprint’; this could be supplied using contrast agents. Carbon nanotubes (CNTs) can be filled with a wide range of inorganic materials, and thus can be used as ‘contrast agents’ if biologically absent elements are encapsulated. Here we show that sealed single-walled CNTs filled with lead, barium and even krypton can be produced, and externally decorated with peptides to provide affinity for sub-cellular targets. The agents are able to highlight specific organelles in multiplexed XRF mapping, and are, in principle, a general and versatile tool for this, and other modes of biological imaging.
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Oct 2016
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[9304]
Abstract: Despite regulation, brain iron increases with aging and may enhance aging processes including neuroinflammation. Increases in magnetic resonance imaging transverse relaxation rates, R2 and R2*, in the brain have been observed during aging. We show R2 and R2* correlate well with iron content via direct correlation to semi-quantitative synchrotron-based X-ray fluorescence iron mapping, with age-associated R2 and R2* increases reflecting iron accumulation. Iron accumulation was concomitant with increased ferritin immunoreactivity in basal ganglia regions except in the substantia nigra (SN). The unexpected dissociation of iron accumulation from ferritin-upregulation in the SN suggests iron dyshomeostasis in the SN. Occurring alongside microgliosis and astrogliosis, iron dyshomeotasis may contribute to the particular vulnerability of the SN. Dietary restriction (DR) has long been touted to ameliorate brain aging and we show DR attenuated age-related in vivo R2 increases in the SN over ages 7 – 19 months, concomitant with normal iron-induction of ferritin expression and decreased microgliosis. Iron is known to induce microgliosis and conversely, microgliosis can induce iron accumulation, which of these may be the initial pathological aging event warrants further investigation. We suggest iron chelation therapies and anti-inflammatory treatments may be putative ‘anti-brain aging’ therapies and combining these strategies may be synergistic.
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Oct 2016
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[12303]
Open Access
Abstract: Calcifications are not only one of the most important early diagnostic markers of breast cancer, but are also increasingly believed to aggravate the proliferation of cancer cells and invasion of surrounding tissue. Moreover, this influence appears to vary with calcification composition. Despite this, remarkably little is known about the composition and crystal structure of the most common type of breast calcifications, and how this differs between benign and malignant lesions. We sought to determine how the phase composition and crystallographic parameters within calcifications varies with pathology, using synchrotron X-ray diffraction. This is the first time crystallite size and lattice parameters have been measured in breast calcifications, and we found that these both parallel closely the changes in these parameters with age observed in fetal bone. We also discovered that these calcifications contain a small proportion of magnesium whitlockite, and that this proportion increases from benign to in situ to invasive cancer. When combined with other recent evidence on the effect of magnesium on hydroxyapatite precipitation, this suggests a mechanism explaining observations that carbonate levels within breast calcifications are lower in malignant specimens.
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Sep 2016
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[9704]
Open Access
Abstract: Transition metal concentrations in the central nervous system (CNS) are altered in neurodegenerative diseases such as Alzheimer’s, Parkinson’s and multiple sclerosis. A common symptom of these diseases is demyelination, which is the degradation of the myelin sheath that encapsulates the neurons in vertebrates. Transition metal concentrations were measured in Long Evans Shaker (LES) rodent model and compared to healthy age-matched controls to investigate the relationship between transition metals and myelination. Micro probe Synchrotron Radiation X-ray Fluorescence (µSRXRF) was used to measure concentrations of manganese (Mn), iron (Fe), copper (Cu), and zinc (Zn) in regions of grey matter and white matter in Shaker rodents and their age-matched Long Evans (LE) controls in the cerebellum and spinal cord. In the cerebellum, the concentrations of all elements were significantly increased in the white matter of the Shaker model, and decreased in the gray matter of the Shaker model in comparison to their age and region matched controls. In the spinal cord samples, concentrations of all metals were higher in white matter and grey matter of Shaker rat spinal cord compared to those in the control rat spinal cord. This study demonstrated that the sensitivity of µSRXRF is sufficient to discriminate between the elemental distributions of gray and white matter of the brain sections and spinal cords in the two groups. The observed significant increase of Mn, Fe, Zn and Cu in the white matter of the Shaker animals in the cerebellum and spinal cord compared to controls could be the result of astrocytic glial cells replacing the myelin in the CNS. Unlike other imaging techniques, the fine resolution of µSRXRF enables specific regions of gray matter structures namely, the molecular layer and the granule layer to be identified in the rat CNS, and their transition metal concentrations to be quantified. This work will further establish µSRXRF as a powerful analytic technique for compositional studies in brain sections from models of brain disease.
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Sep 2016
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B16-Test Beamline
I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[11372, 12446]
Abstract: Aging leads to an increase in iron-loaded cellular structures in the choroid of the eye. This study was carried out to determine the distribution and content of iron, zinc and copper in the macular retina, choroid and retrobulbar optic nerve of young (4-5 years, n=3) and aged (15-16 years, n=5) male non-human primates, Macaca fascicularis, whose ocular anatomy is similar to humans. Thirty-µm-thick tissue sections were analysed with synchrotron X-ray fluorescence and stained histologically for iron deposition. Quantitative measurements showed high levels of iron, zinc and copper in the choroid and retinal pigment epithelium in the macular area and arachnoid layer in the retrobulbar optic nerve. In aged animals compared to young ones, there was an increase in iron in the choroid with larger deposits and and iron-loaded cellular structures. Iron-accumulation within these cellular structures may contribute to choroidal function impairment in aging and age-related macular degeneration.
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Aug 2016
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I18-Microfocus Spectroscopy
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Kimberly L.
Desmond
,
Alia
Al-ebraheem
,
Rafal
Janik
,
Wendy
Oakden
,
Jacek M.
Kwiecien
,
Wojciech
Dabrowski
,
Radoslaw
Rola
,
Tina
Geraki
,
Michael
Farquharson
,
Greg J.
Stanisz
,
Nicholas A.
Bock
Diamond Proposal Number(s):
[9704]
Abstract: A model of dysmyelination, the Long Evans Shaker (les) rat, was used to study the contribution of myelin to MR tissue properties in white matter. A large region of white matter was identified in the deep cerebellum and was used for measurements of the MR relaxation rate constants, R1 = 1/T1 and R2 = 1/T2, at 7 T. In this study, R1 of the les deep cerebellar white matter was found to be 0.55 ± 0.08 s –1 and R2 was found to be 15 ± 1 s–1, revealing significantly lower R1 and R2 in les white matter relative to wild-type (wt: R1 = 0.69 ± 0.05 s–1 and R2 = 18 ± 1 s–1). These deviated from the expected ΔR1 and ΔR2 values, given a complete lack of myelin in the les white matter, derived from the literature using values of myelin relaxivity, and we suspect that metals could play a significant role. The absolute concentrations of the paramagnetic transition metals iron (Fe) and manganese (Mn) were measured by a micro-synchrotron radiation X-ray fluorescence (μSRXRF) technique, with significantly greater Fe and Mn in les white matter than in wt (in units of μg [metal]/g [wet weight tissue]: les: Fe concentration,19 ± 1; Mn concentration, 0.71 ± 0.04; wt: Fe concentration,10 ± 1; Mn concentration, 0.47 ± 0.04). These changes in Fe and Mn could explain the deviations in R1 and R2 from the expected values in white matter. Although it was found that the influence of myelin still dominates R1 and R2 in wt rats, there were non-negligible changes in the contribution of the metals to relaxation. Although there are already problems with the estimation of myelin from R1 and R2 changes in disease models with pathology that also affects the relaxation rate constants, this study points to a specific pitfall in the estimation of changes in myelin in diseases or models with disrupted concentrations of paramagnetic transition metals. Copyright © 2016 John Wiley & Sons, Ltd.
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May 2016
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I18-Microfocus Spectroscopy
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Open Access
Abstract: Neoplastic and healthy brain tissues were analysed to discern the changes in the spatial distribution and overall concentration of elements using micro X-ray fluorescence spectroscopy. High-resolution distribution maps of minor and trace elements such as P, S, Cl, K, Ca, Fe, Cu and Zn made it possible to distinguish between homogeneous cancerous tissue and areas where some structures could be identified, such as blood vessels and calcifications. Concentrations of the elements in the selected homogeneous areas of brain tissue were compared between tumours with various malignancy grades and with the controls. The study showed a decrease in the average concentration of Fe, P, S and Ca in tissues with high grades of malignancy as compared to the control group, whereas the concentration of Zn in these tissues was increased. The changes in the concentration were found to be correlated with the tumour malignancy grade. The efficacy of micro X-ray fluorescence spectroscopy to distinguish between various types of cancer based on the concentrations of studied elements was confirmed by multivariate discriminant analysis. Our analysis showed that the most important elements for tissue classification are Cu, K, Fe, Ca, and Zn. This method made it possible to correctly classify histopathological types in 99.93% of the cases used to build the model and in as much as 99.16% of new cases
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Dec 2015
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