I12-JEEP: Joint Engineering, Environmental and Processing
|
Diamond Proposal Number(s):
[38206]
Open Access
Abstract: Masonry structures predominantly work under compression; elasticity in constituent materials is therefore typically characterised during uniaxial compression tests via load and deformation measurements. In most practical applications, deformation measurements can only be conducted at the surface of the sample. To understand the influence of this restriction on characterisation results, this study conducts in-situ load tests on hydraulic lime mortar samples with both surface and volumetric imaging, using stereo cameras and synchrotron X-rays. The imaging data are processed with Digital Image and Volume Correlation algorithms (local and global) to obtain full-field displacements and strains. Deformation measurements are then used to conduct surface characterisation with the Virtual Fields Method (VFM) and volumetric characterisation with Finite Element Model Updating (FEMU). Since the inverse models indicate limited identifiability for Poisson’s ratio, only the Young’s moduli are compared. Results indicate that accurate Young’s moduli can be obtained from surface measurements, provided that through-thickness load gradients are considered by averaging VFM results from front and back faces of the sample. In addition, it is shown that a surface characterisation domain away from contacts needs to be chosen to ensure that surface strains are representative of bulk behaviour. Finally, a systematic reduction of elastic moduli with increasing loads is observed, suggesting damage development at relatively low stress levels in hydraulic lime mortars.
|
Sep 2026
|
|
I13-2-Diamond Manchester Imaging
|
Diamond Proposal Number(s):
[37346]
Open Access
Abstract: During the Paleogene, bees diversified extensively after expanding from tropical regions into northern forests surrounding the future Baltic Sea, evolving alongside diverse angiosperms. Most fossil bee diversity is preserved in amber, which captures morphology but rarely behavior or ecology. Using synchrotron X-ray imaging, we describe a new leaf-cutter bee species, †Protolithurgus acarophorus sp. nov., from two specimens in Baltic amber. This is only the second known record of the extinct tribe †Protolithurgiini, which displays both ancestral and derived megachilid traits. The holotype preserves exceptional anatomical detail and reveals ecological insights, including compacted floral rewards in the hind-leg scopa, a pollen-carrying strategy rare in living Megachilidae. We also document the first fossil bee-mite association, suggesting unspecialized kleptoparasitic interactions, and reconstruct thoracic musculature dimensions. Together, these findings provide rare evidence of the foraging ecology, parasite relationships, and biomechanics of the earliest leaf-cutter bees.
|
Aug 2026
|
|
I13-2-Diamond Manchester Imaging
|
Diamond Proposal Number(s):
[28141]
Open Access
Abstract: This manuscript describes a workflow for automated data collection that uses a robotic arm for sample exchange, significantly improving data collection efficiency. The setup, implemented for synchrotron X-ray imaging at the Diamond Light Source (DLS) I13-2, Imaging beamline, utilizes a robot to achieve high-throughput serial tomography (3D) or imaging (2D). At present, for many experiments, the time required for manual sample exchange and alignment is comparable to, or even exceeds, the duration of the tomography scan itself. To maximize the efficient use of available beam time and increase experimental throughput, automating sample exchange and alignment is essential. Using the robot as a sample changer can increase throughput by at least 4-10 times compared to manual procedures, depending on which pixel size is chosen. With the Diamond II machine and the I13L beamlines Operando Coherent TOmography and Ptychographic Imaging (OCTOPI) upgrades, the increased X-ray flux will further reduce the experimental scan times, making the system even more efficient. Furthermore, the automation enables remote data collection, including an optional mail-in service for users. Automated sample centering allows fully unattended scanning, which can be performed remotely. This represents a unique and innovative feature of the system. This manuscript describes the complete procedure, including sample preparation, mounting on specialized holders, transport to the beamline, and placement on the dedicated trays for robotic sample exchange. The procedure for automated sample centering and the subsequent tomography reconstruction pipeline are presented.
|
Jul 2026
|
|
I12-JEEP: Joint Engineering, Environmental and Processing
|
Diamond Proposal Number(s):
[11204]
Open Access
Abstract: Background/Objectives: Trabecular bone exhibits brittle behaviour governed by microscale deformation and damage, yet quantifying crack progression is difficult because classical fracture-mechanics approaches do not apply to architecturally discontinuous porous tissue. This pilot study evaluates whether synchrotron X-ray computed tomography (XCT) combined with digital volume correlation (DVC) can provide a practical, geometry-normalised approach for quantifying crack-opening behaviour in human trabecular bone. Methods: Semicylindrical specimens from femoral heads of hip-fracture donors (n = 5) and non-fracture controls (n = 5) underwent stepwise three-point bending during XCT imaging. Full-field displacement maps were used to measure crack mouth opening displacement (CMOD), crack length (a), and their ratio CMOD/a, used here as a geometry-normalised comparative descriptor of brittle response rather than an intrinsic material property. Automated phase-congruency crack detection (PCCD) was compared with manual measurement. Results: XCT–DVC resolved three-dimensional displacement discontinuities during crack initiation and propagation in all specimens. Hip-fracture donors exhibited significantly lower critical crack-opening ratios (CMOD/a)* than Controls (median 0.31 vs. 0.47; p = 0.008) and reached instability at lower applied loads. Total crack extension (Δa*) was similar between groups. Automated crack tracking using phase-congruency-based segmentation showed excellent agreement with manual measurements (r2 = 0.98), supporting reliable extraction of crack geometry from DVC displacement fields. Conclusions: In this small pilot sample, XCT–DVC provided a feasible, geometry-normalised approach for comparing crack-opening behaviour where classical fracture-mechanics parameters cannot be applied. The close agreement between automated and manual crack measurements supports the reproducibility of the displacement-based measurement pipeline. The lower critical CMOD/a in hip-fracture specimens may indicate a more brittle comparative response. However, given the small sample, differing sex distribution, and lower bone volume fraction in the hip-fracture group, these findings are preliminary and require confirmation in larger cohorts. Establishing whether the observed difference reflects intrinsic tissue brittleness, architectural factors, or both is an important objective for future work in microstructure-matched cohorts.
|
Jul 2026
|
|
Krios I-Titan Krios I at Diamond
|
Yu
Zhang
,
Lijie
Zhong
,
Yun
Song
,
Mingcheng
Guo
,
Keli
Ren
,
Tingting
Yang
,
Yixin
Huang
,
Ilia
Sirotkin
,
Gangshun
Yi
,
Fang
Jiao
,
Peijun
Zhang
,
Robert J. C.
Gilbert
,
Tao
Ni
,
Xiulian
Yu
Diamond Proposal Number(s):
[21004, 29812]
Open Access
Abstract: Malaria-causing Plasmodium parasites must pass through several host cell types to complete their life cycle. This cell traversal is facilitated by perforin-like proteins (PLPs), among which PLP2 is essential for erythrocyte rupture by gametocytes. However, the mechanism by which PLP2 forms pores is not yet understood. Here, we combine cryo-electron microscopy and tomography to reveal the structural basis of Plasmodium vivax PLP2-mediated membrane attack. PvPLP2 assembles on lipid bilayers into heterogeneous arc- and ring-shaped pores with variable stoichiometries. Among them, we determine the structure of a 17-subunit pore complex in which the pore-forming MACPF domains form the central β-barrel, while the peripheral Apicomplexan PLP C-terminal β-pleated sheet (APCβ) domains anchor the complex to the membrane surface. A disulfide-stabilized mutant captures an intermediate pre-pore complex prior to membrane insertion, delineating the structural transitions that underpin β-barrel deployment. Functionally, PvPLP2 acts preferentially on the inner leaflet of the erythrocyte membrane, a specificity driven by its affinity for negatively charged lipids. Together, these findings establish the pore-formation pathway for a key Plasmodium virulence factor and provide a structural framework for rational design of transmission-blocking agents that prevent gametocyte egress.
|
Jul 2026
|
|
I13-2-Diamond Manchester Imaging
|
Louis
Verschuren
,
Vladimir
Matskovsky
,
Matthieu N
Boone
,
Pieter
De Frenne
,
Tom
De Mil
,
Kristof
Haneca
,
Shashidhara
Marathe
,
Charlotte
Pearson
,
Christoph
Rau
,
Ute
Sass-Klaassen
,
Joris
Van Acker
,
Kris
Vandekerkhove
,
Kaz
Wanelik
,
Julia
Weidemüller
,
Valerie
Trouet
,
Jan
Van Den Bulcke
Diamond Proposal Number(s):
[36278]
Open Access
Abstract: Maximum latewood density of conifers is the most widely used annual-resolution summer temperature proxy. Regions with few conifers, however, remain underrepresented in global paleoclimate records. Here, we use x-ray micro–computed tomography (micro-CT) to show that latewood density measurements of European beech (Fagus sylvatica L.) in a temperate lowland forest exhibit a strong summer (May to September) temperature signal (r = 0.73; 1833 to 2022 CE). Complementary wood anatomical analyses using deep learning segmentation reveal that both vessel and fiber anatomy are key drivers of latewood density variability and its temperature sensitivity. By integrating these anatomical responses, x-ray micro-CT–based latewood density measurements generate a robust and temporally stable summer temperature signal. Our results highlight the untapped potential of broad-leaved tree species for density-based climate reconstructions in temperate regions and open previously unidentified avenues for high-resolution paleoclimatology beyond the use of conifers.
|
Jul 2026
|
|
I12-JEEP: Joint Engineering, Environmental and Processing
|
Abstract: Small (less than 0.1%) decreases and increases in seismic wave velocity are widely observed in rocks and fault zones following earthquakes or stress perturbations in both laboratory and field settings. In studies of slow dynamics, this behaviour is commonly interpreted in terms of damage and healing. Despite extensive phenomenological descriptions, the physical mechanisms responsible for these velocity changes remain poorly constrained. This thesis investigates the mechanical and microstructural origins of velocity recovery in sandstone using laboratory acoustics combined with time-resolved synchrotron X-ray micro-tomography. A series of controlled laboratory experiments were performed on Berea and Bentheimer sandstones using mallet-blow and pump-probe acoustic configurations to quantify transient velocity changes following stress perturbations. Benchtop experiments employed coda wave interferometry to track velocity recovery and were modelled using the relaxation framework of Snieder, as well as a newly developed phenomenological model that provides an alternative description of the recovery process. Dynamic pump-probe experiments resolved the nonlinear elastic response of the samples under cyclic stressing and identified those exhibiting the strongest and most reproducible recovery signatures. Together, these experiments established a robust experimental and modelling foundation for the subsequent synchrotron imaging studies.
|
Jul 2026
|
|
Krios IV-Titan Krios IV at Diamond
|
Diamond Proposal Number(s):
[42268, 35335]
Abstract: Central to Alzheimer’s disease pathology are prefibrillar oligomer assemblies of amyloid-β (Aβ) peptide. A widely discussed hypothesis proposes that amyloid-β oligomers insert into neuronal lipid membranes, disrupting their integrity and causing a loss of cellular homeostasis in Alzheimer’s disease. This membrane disruption is believed to be a major source of Aβ-induced neurotoxicity. Cryo electron tomography (cryo-ET) has facilitated 3D nanoscale imaging of Aβ-membrane interactions under near-native conditions. Analyses of small extracellular vesicles (sEVs) reveals that Aβ oligomers including annular and curvilinear extended oligomers (CLEOs) exhibit extensive binding to cell-derived lipid membranes, including insertion into and carpeting of the lipid bilayer. Notably, these oligomeric assemblies were also internalized and concentrated within the cell-derived exosomes and other small sEVs. Enrichment of Aβ oligomers within the vesicles typically ranged between 5 to 20 times the external Aβ levels depending on the vesicle size and curvature. In contrast, monomeric and fibrillar forms of Aβ displayed minimal membrane interaction. Once internalized CLEOs appear to be trapped in an oligomeric form and do not readily go on to form fibrils. Studies with vesicles of brain lipid extract indicate the Aβ internalization does not require the presence of a membrane protein. Our in vitro studies underscore the membrane-disruptive capacity of oligomeric Aβ species and suggest a role of sEVs in concentrating toxic Aβ oligomers and transporting oligomers across the brain interstitium.
|
Jul 2026
|
|
Talos-Talos Arctica at Diamond
|
Stuart R.
Castillo
,
Natalie M.
Robinson
,
Maksymilian
Dziura
,
Omotayo
Gbadamosi
,
Dominik
Dziura
,
Isabelle J.
Dib
,
Eilis C.
Bragginton
,
Emma
Buzzard
,
Karen M.
Davies
,
Najet
Mahmoudi
,
Piotr A.
Zolnierczuk
,
Elizabeth G.
Kelley
,
Drew
Marquardt
Diamond Proposal Number(s):
[40460]
Open Access
Abstract: Herein, we show compelling evidence of structural remodeling in mitochondrial membranes of cancerous colon cells when compared to their noncancerous counterparts. The physical characteristics of cancerous and noncancerous mitochondria were systematically investigated using small-angle neutron scattering (SANS), cryogenic electron tomography (cryo-ET), neutron spin–echo (NSE) spectroscopy, and high-throughput lipidomics. Our results exhibit evidence of both mechanical softening of the mitochondrial membrane, as seen by NSE, and ultrastructure rearrangements of the inner mitochondrial membranes, as seen by SANS and cryo-ET, in cancerous cells. These differences in properties seem to be correlated with changes in the lipidome, suggesting the changes are due to the limited number of lipid classes immediately available during the rapid proliferation of cancerous cells. Finally, we highlight a mechanism by which pancratistatin (PST), a natural anticancer therapeutic candidate, may selectively induce apoptosis by altering the mechanical properties and ultrastructure of cancerous mitochondria while sparing noncancerous mitochondria. Discovery of these structural anomalies will lead to improvements in diagnostics, therapeutic development, and the advancement of targeted approaches for traditionally complex cancers which evade our current treatments.
|
Jul 2026
|
|
I13-2-Diamond Manchester Imaging
|
Atal
Pande
,
Lucille
Rose
,
Sam J.
England
,
Imran
Rahman
,
Ricardo
Pérez-De La Fuente
,
Andrew J.
Bodey
,
Kaz
Wanelik
,
Christian M.
Schlepütz
,
Jonathan
Günther
,
Christoph
Rau
,
Alexander
Blanke
,
Lauren
Sumner-Rooney
Diamond Proposal Number(s):
[20721, 32952, 17205]
Open Access
Abstract: Vision is one of the most important senses used by animals and contributes to fundamental behaviors, including foraging, navigation, and mate detection and selection.1 Although much is known about how eye position and orientation correlate to ecology in the context of binocularity,2 animals with multipartite visual systems (more than two eyes) remain comparatively neglected. Spiders are highly successful predators that occupy a range of ecological niches and usually possess eight eyes. Here, we use three-dimensional geometric morphometrics and evolutionary modeling to test whether eye positions, orientations, and interocular angles correlate with hunting strategies in 52 species across the spider phylogeny. We demonstrate that eye configurations diversified from an ancestral medial cluster, as seen in modern trapdoor spiders, to a halo-like configuration in orb-weavers, and to the frontal clustering of eyes in several members of derived spider lineages. We show that visual hunters have the highest disparity and evolutionary rates in the configuration of their eyes but display a distinct morphological signature with multiple eye pairs concentrated at the front of the carapace. Moreover, we quantify the extent to which eye configuration is modular and show that the position and orientation of the eye pairs evolve semi-independently of each other. Our findings demonstrate that modularity in the spider visual system facilitates not only the specialization of individual eyes but also the whole architecture of the visual system, in line with different hunting strategies, body plans, and ecological niches.
|
Jul 2026
|
|