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Ferredoxin-linked flavoenzyme defines a family of pyridine nucleotide-independent thioredoxin reductases

DOI: 10.1073/pnas.1812781115 DOI Help

Authors: Ruben M. Buey (Universidad de Salamanca) , David Fernandez-Justel (Universidad de Salamanca) , Jose M. De Pereda (Consejo Superior de Investigaciones Científicas; Universidad de Salamanca) , José L. Revuelta (Universidad de Salamanca) , Peter Schürmann (Université de Neuchâtel) , Bob B. Buchanan (University of California, Berkeley) , Monica Balsera (Consejo Superior de Investigaciones Científicas)
Co-authored by industrial partner: No

Type: Journal Paper
Journal: Proceedings Of The National Academy Of Sciences , VOL 239

State: Published (Approved)
Published: December 2018
Diamond Proposal Number(s): 14739

Abstract: Ferredoxin-dependent thioredoxin reductase was identified 35 y ago in the fermentative bacterium Clostridium pasteurianum [Hammel KE, Cornwell KL, Buchanan BB (1983) Proc Natl Acad Sci USA 80:3681–3685]. The enzyme, a flavoprotein, was strictly dependent on ferredoxin as reductant and was inactive with either NADPH or NADH. This early work has not been further pursued. We have recently reinvestigated the problem and confirmed that the enzyme, here designated ferredoxin-dependent flavin thioredoxin reductase (FFTR), is a flavoprotein. The enzyme differs from ferredoxin−thioredoxin reductase (FTR), which has a signature [4Fe−4S] cluster, but shows structural similarities to NADP-dependent thioredoxin reductase (NTR). Comparative amino acid sequence analysis showed that FFTR is present in a number of clostridial species, some of which lack both FTR and an archetypal NTR. We have isolated, crystallized, and determined the structural properties of FFTR from a member of this group, Clostridium acetobutylicum, both alone and in complex with Trx. The structures showed an elongated FFTR homodimer, each monomer comprising two Rossmann domains and a noncovalently bound FAD cofactor that exposes the isoalloxazine ring to the solvent. The FFTR structures revealed an alternative domain organization compared with NTR that enables the enzyme to accommodate Fdx rather than NADPH. The results suggest that FFTR exists in a range of conformations with varying degrees of domain separation in solution and that the stacking between the two redox-active groups for the transfer of reducing equivalents results in a profound structural reorganization. A mechanism in accord with the findings is proposed.

Journal Keywords: flavoprotein; ferredoxin; protein conformational dynamics; redox-active disulfide; thioredoxin reductase

Diamond Keywords: Bacteria; Enzymes

Subject Areas: Biology and Bio-materials

Instruments: B21-High Throughput SAXS , I24-Microfocus Macromolecular Crystallography

Other Facilities: XALOC at ALBA

Added On: 05/12/2018 08:23

Discipline Tags:

Structural biology Life Sciences & Biotech

Technical Tags:

Diffraction Scattering Macromolecular Crystallography (MX) Small Angle X-ray Scattering (SAXS)