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Discovery, activity and characterisation of an AA10 lytic polysaccharide oxygenase from the shipworm symbiont Teredinibacter turnerae

DOI: 10.1186/s13068-019-1573-x DOI Help

Authors: Claire A. Fowler (University of York) , Federico Sabbadin (University of York) , Luisa Ciano (University of York; University of Manchester) , Glyn R. Hemsworth (University of York; University of Leeds) , Luisa Elias (University of York) , Neil Bruce (University of York) , Simon Mcqueen-Mason (University of York) , Gideon J. Davies (University of York) , Paul H. Walton (University of York)
Co-authored by industrial partner: No

Type: Journal Paper
Journal: Biotechnology For Biofuels , VOL 12

State: Published (Approved)
Published: September 2019
Diamond Proposal Number(s): 13587

Open Access Open Access

Abstract: Background: The quest for novel enzymes for cellulosic biomass-degradation has recently been focussed on lytic polysaccharide monooxygenases (LPMOs/PMOs), Cu-containing proteins that catalyse the oxidative degradation of otherwise recalcitrant polysaccharides using O2 or H2O2 as a co-substrate. Results: Although classical saprotrophic fungi and bacteria have been a rich source of lytic polysaccharide monooxygenases (LPMOs), we were interested to see if LPMOs from less evident bio-environments could be discovered and assessed for their cellulolytic activity in a biofuel context. In this regard, the marine shipworm Lyrodus pedicellatus represents an interesting source of new enzymes, since it must digest wood particles ingested during its natural tunnel boring behaviour and plays host to a symbiotic bacterium, Teredinibacter turnerae, the genome of which has revealed a multitude of enzymes dedicated to biomass deconstruction. Here, we show that T. turnerae encodes a cellulose-active AA10 LPMO. The 3D structure, at 1.4 Å resolution, along with its EPR spectrum is distinct from other AA10 polysaccharide monooxygenases insofar as it displays a “histidine-brace” catalytic apparatus with changes to the surrounding coordination sphere of the copper. Furthermore, TtAA10A possesses a second, surface accessible, Cu site 14 Å from the classical catalytic centre. Activity measurements show that the LPMO oxidises cellulose and thereby significantly augments the rate of degradation of cellulosic biomass by classical glycoside hydrolases. Conclusion: Shipworms are wood-boring marine molluscs that can live on a diet of lignocellulose. Bacterial symbionts of shipworms provide many of the enzymes needed for wood digestion. The shipworm symbiont T. turnerae produces one of the few LPMOs yet described from the marine environment, notably adding to the capability of shipworms to digest recalcitrant polysaccharides.

Journal Keywords: Oxygenase; Enzyme; Cellulose; PMO; LPMO; Shipworm; 3D structure; CAZyme

Diamond Keywords: Enzymes; Biofuel

Subject Areas: Biology and Bio-materials, Chemistry, Energy

Instruments: I04-Macromolecular Crystallography

Added On: 09/10/2019 08:33


Discipline Tags:

Bioenergy Earth Sciences & Environment Sustainable Energy Systems Energy Climate Change Biochemistry Catalysis Chemistry Structural biology Life Sciences & Biotech

Technical Tags:

Diffraction Macromolecular Crystallography (MX)