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Abstract: Vacuolar?type ATPases (V?ATPases) exist in various cellular membranes of many organisms to regulate physiological processes by controlling the acidic environment. Here, we have determined the crystal structure of the A3B3 subcomplex of V?ATPase at 2.8 Å resolution. The overall construction of the A3B3 subcomplex is significantly different from that of the ?3?3 sub?domain in FoF1?ATP synthase, because of the presence of a protruding ‘bulge’ domain feature in the catalytic A subunits. The A3B3 subcomplex structure provides the first molecular insight at the catalytic and non?catalytic interfaces, which was not possible in the structures of the separate subunits alone. Specifically, in the non?catalytic interface, the B subunit seems to be incapable of binding ATP, which is a marked difference from the situation indicated by the structure of the FoF1?ATP synthase. In the catalytic interface, our mutational analysis, on the basis of the A3B3 structure, has highlighted the presence of a cluster composed of key hydrophobic residues, which are essential for ATP hydrolysis by V?ATPases.

Open Access

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Abstract: A molecular understanding of the unique aspects of dietary fructose metabolism may be the key to understanding and controlling the current epidemic of fructose-related obesity, diabetes and related adverse metabolic states in Western populations. Fructose catabolism is initiated by its phosphorylation to fructose 1-phosphate, which is performed by ketohexokinase (KHK). Here, the crystal structures of the two alternatively spliced isoforms of human ketohexokinase, hepatic KHK-C and the peripheral isoform KHK-A, and of the ternary complex of KHK-A with the substrate fructose and AMP-PNP are reported. The structure of the KHK-A ternary complex revealed an active site with both the substrate fructose and the ATP analogue in positions ready for phosphorylation following a reaction mechanism similar to that of the pfkB family of carbohydrate kinases. Hepatic KHK deficiency causes the benign disorder essential fructosuria. The effects of the disease-causing mutations (Gly40Arg and Ala43Thr) have been modelled in the context of the KHK structure.

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Abstract: Energy-dispersive X-ray absorption spectroscopy is an increasingly powerful tool for the investigation of kinetic processes in chemical systems as an element-specific local structure and electronic-state probe. Advances in synchrotron radiation sources and detector technology are pushing the time resolution of the method to ever shorter periods, currently milliseconds to microseconds, while also providing a concomitant improvement in data quality that now makes feasible the identification of structural and electronic motifs characteristic of intermediate states in chemical processes. To maximize the value of the newly available high-quality time-resolved data, techniques for consistent data normalization and structural component analysis have been developed and here are illustrated in a model study of the electron-transfer reaction between [IrCl6]2- with [Co(CN)5]3-.

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Abstract: Subtleties in the electronic structure of complex materials can be directly observed, in great detail, by means of the Bragg diffraction of x-rays whose energy matches an atomic resonance. Strange atomic multipoles can be encountered in the interpretation of measured Bragg intensities, e.g., chirality and magnetic charge. Additionally, the x-ray technique allows the direct observation of the enantiomorphic screw-axis in chiral crystals, such as tellurium, low quartz and berlinite.