NONE-No attached Diamond beamline
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Abstract: Using X-ray absorption spectroscopy (XAS) at the Cu L(2,3) and Co L(2,3) edges, we demonstrate that the valence state of copper in the thiospinel carrollite (CuCo(2)S(4)) is Cu(+) with a d count of Cu d(9.8). The Co has a d count of d(6.4), so that the highly covalent mineral has an electronic formula of Cu(1.2+)(Co(2.4+))(2)(S(1.5-))(4). There is half a hole per atom in the S 3p band (per unit formula); the Co L(2,3) XAS indicates a covalent low-spin electronic structure. These data dispel the notion of the presence of Cu(2+) in carrollite.
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Oct 2008
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NONE-No attached Diamond beamline
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Abstract: We demonstrate a sensitivity of the Mn 3d valence states to strain in the ferromagnetic semiconductors (Ga, Mn)As and (Al, Ga, Mn)As using x-ray magnetic circular dichroism (XMCD). The spectral shape of the Mn L(2,3) XMCD is dependent on the orientation of the magnetization, and features with cubic and uniaxial dependence are distinguished. Reversing the strain reverses the sign of the uniaxial anisotropy of the Mn L(3) prepeak which is ascribed to transitions from the Mn 2p core level to p-d hybridized valence band hole states. With increasing carrier localization, the L(3) prepeak intensity increases, indicating an increasing 3d character of the hybridized holes.
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Mar 2008
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NONE-No attached Diamond beamline
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Abstract: Recent experimental investigations of the rotational motion of methane and molecular hydrogen using inelastic neutron scattering (INS) measurements in combination with thermodynamic techniques have provided a unique view of the evolution of the interaction of these two molecules with the MgO (100) surface and graphite basal plane. Despite significant differences in the chemical and physical properties and surface symmetry of these two adsorbents, the dynamical behavior of the adsorbed films is remarkably similar. The interaction of a CH4 monolayer solid with MgO and graphite, as monitored by the behavior of the J = 0 → J = 1 free rotor transition, is so strong that there is no evidence for unhindered rotation of the molecule below 20 K. Using this same transition as a probe, H2 monolayer solids exhibit nearly free or significantly hindered motion on graphite and MgO (100) surfaces, respectively. Investigations of CH4 and H2 multilayer films on MgO find that once the film thickness exceeds ∼3 layers, the molecule−molecule interactions predominantly determine the dynamical properties of the molecular film furthest from the surface. INS signals indicate that the dynamical motion in thicker films is closely related to that observed in the bulk system. The results of these studies serve as a valuable pathway for developing a qualitatively accurate description of the potential energy surfaces that govern the microscopic properties of these systems.
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Jan 2009
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NONE-No attached Diamond beamline
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Abstract: The local structure of the Au(111)(?3×?3)R30° -methylthiolate surface phase has been investigated by S?K -edge near-edge s-ray absorption fine structure(NEXAFS) both experimentally and theoretically and by experimental normal-incidence x-ray standing waves (NIXSW) at both the C and S atomic sites. NEXAFS shows not only excitation into the intramolecular ? ? S–C resonance but also into a ? ? S–Au orbital perpendicular to the surface, clearly identifying the local S headgroup site as atop a Au atom. Simulations show that it is not possible, however, to distinguish between the two possible adatom reconstruction models; a single thiolate species atop a hollow-site Au adatom or a dithiolate moiety comprising two thiolate species bonded to a bridge-bonded Au adatom. Within this dithiolate moiety a second ? ? S–Au orbital that lies near parallel to the surface has a higher energy that overlaps that of the ? ? S–C resonance. The new NIXSW data show the S–C bond to be tilted by 61° relative to the surface normal, with a preferred azimuthal orientation in ?211? , corresponding to the intermolecular nearest-neighbor directions. This azimuthal orientation is consistent with the thiolate being atop a hollow-site Au adatom, but not consistent with the originally proposed Au-adatom-dithiolate moiety. However, internal conformational changes within this species could, perhaps, render this model also consistent with the experimental data.
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Mar 2009
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NONE-No attached Diamond beamline
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M.
Laver
,
C. J.
Bowell
,
E. M.
Forgan
,
A. B.
Abrahamsen
,
D.
Fort
,
C. D.
Dewhurst
,
S.
Mühlbauer
,
D. K.
Christen
,
J.
Kohlbrecher
,
R.
Cubitt
,
S.
Ramos
Abstract: High-purity niobium exhibits a surprisingly rich assortment of vortex lattice VL structures for fields applied parallel to a fourfold symmetry axis, with all observed VL phases made up of degenerate domains that spontaneously break some crystal symmetry. Yet a single regular hexagonal VL domain is observed at all temperatures and fields parallel to a threefold symmetry axis. We report a detailed investigation of the transition between these lush and barren VL landscapes, discovering new VL structures and phase transitions at high fields. We show that the number and relative population of VL domains is intrinsically tied to the underlying crystal symmetry. We discuss how subtle anisotropies of the crystal may generate the remarkable VLs observed.
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Jan 2009
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NONE-No attached Diamond beamline
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Abstract: Nanocomposites of high-density polyethylene (HDPE) and carbon nanotubes (CNT) of different geometries (single wall, double wall, and multiwall; SWNT, DWNT, and MWNT) were prepared by in situ polymerization of ethylene on CNT whose surface had been previously treated with a metallocene catalytic system. In this work, we have studied the effects of applying the successive self-nucleation and annealing thermal fractionation technique (SSA) to the nanocomposites and have also determined the influence of composition and type of CNT on the isothermal crystallization behavior of the HDPE. SSA results indicate that all types of CNT induce the formation of a population of thicker lamellar crystals that melt at higher temperatures as compared to the crystals formed in neat HDPE prepared under the same catalytic and polymerization conditions and subjected to the same SSA treatment. Furthermore, the peculiar morphology induced by the CNT on the HDPE matrix allows the resolution of thermal fractionation to be much better. The isothermal crystallization results indicated that the strong nucleation effect caused by CNT reduced the supercooling needed for crystallization. The interaction between the HDPE chains and the surface of the CNT is probably very strong as judged by the results obtained, even though it is only physical in nature. When the total crystallinity achieved during isothermal crystallization is considered as a function of CNT content, it was found that a competition between nucleation and topological confinement could account for the results. At low CNT content the crystallinity increases (because of the nucleating effect of CNT on HDPE), however, at higher CNT content there is a dramatic reduction in crystallinity reflecting the increased confinement experienced by the HDPE chains at the interfaces which are extremely large in these nanocomposites. Another consequence of these strong interactions is the remarkable decrease in Avrami index as CNT content increases. When the Avrami index reduces to 1 or lower, nucleation dominates the overall kinetics as a consequence of confinement effects. Wide-angle X-ray experiments were performed at a high-energy synchrotron source and demonstrated that no change in the orthorhombic unit cell of HDPE occurred during crystallization with or without CNT.
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Feb 2008
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NONE-No attached Diamond beamline
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Abstract: Coherent X-ray Diffraction Imaging (CXDI) is a powerful method of imaging single crystalline grains within a powder. Direct Fourier transformation of the oversampled diffraction pattern surrounding a Bragg peak is possible once the phases have been obtained using a 'support' constraint. The image is in general complex with the phase representing a projection of the atomic displacements allowing access to the internal strains inside the crystal. CXDI relies crucially on the production of a coherent beam of X-rays, which is one of tire technical advances of the latest 3rd generation Synchroton Radiation (SR) sources. It is shown here how the use of a secondary Source in the design of the X-ray beamline allows the coherence to be controlled continuously over a finite range without any loss of flux. The conclusions will have significant impact on instruments currently being designed at tire Diamond Light Source and the new National Synchrotron Light Source (NSLS-2).
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Feb 2009
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NONE-No attached Diamond beamline
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Abstract: The open-reading frame (ORF) DR_1419 in the Deinococcus radiodurans genome is annotated as a representative of the wide family of tunicamycin-resistance proteins as identified in a range of bacterial genomes. The D. radiodurans ORF DR_1419 was cloned and expressed; the protein TmrD was crystallized and its X-ray crystal structure was determined to 1.95 angstrom resolution. The structure was determined using single-wavelength anomalous diffraction with selenomethionine-derivatized protein. The refined structure is the first to be reported for a member of the tunicamycin-resistance family. It reveals strong structural similarity to the family of nucleoside monophosphate kinases and to the chloramphenicol phosphotransferase of Streptomyces venezuelae, suggesting that the mode of action is possibly by phosphorylation of tunicamycin.
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May 2008
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NONE-No attached Diamond beamline
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Abstract: Thioredoxin functions in nearly all organisms as the major thiol-disulfide oxidoreductase within the cytosol. Its prime purpose is to maintain cysteine-containing proteins in the reduced state by converting intramolecular disulfide bonds into dithiols in a disulfide exchange reaction. Thioredoxin has been reported to contribute to a wide variety of physiological functions by interacting with specific sets of substrates in different cell types. To investigate the function of the essential thioredoxin A (TrxA) in the low-GC Gram-positive bacterium Bacillus subtilis, we purified wild-type TrxA and three mutant TrxA proteins that lack either one or both of the two cysteine residues in the CxxC active site. The pure proteins were used for substrate-binding studies known as "mixed disulfide fishing" in which covalent disulfide-bonded reaction intermediates can be visualized. An unprecedented finding is that both active-site cysteine residues can form mixed disulfides with substrate proteins when the other active-site cysteine is absent, but only the N-terminal active-site cysteine forms stable interactions. A second novelty is that both single-cysteine mutant TrxA proteins form stable homodimers due to thiol oxidation of the remaining active-site cysteine residue. To investigate whether these dimers resemble mixed enzyme-substrate disulfides, the structure of the most abundant dimer, C32S, was characterized by X-ray crystallography. This yielded a high-resolution (1.5A) X-ray crystallographic structure of a thioredoxin homodimer from a low-GC Gram-positive bacterium. The C32S TrxA dimer can be regarded as a mixed disulfide reaction intermediate of thioredoxin, which reveals the diversity of thioredoxin/substrate-binding modes.
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Jun 2008
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NONE-No attached Diamond beamline
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Abstract: The orientational ordering of the nematic phase of a polyethylene glycol (PEG)-peptide block copolymer in aqueous solution is probed by small-angle neutron scattering (SANS), with the sample subjected to steady shear in a Couette cell. The PEG-peptide conjugate forms fibrils that behave as semiflexible rodlike chains. The orientational order parameters P2 and P4 are obtained by modeling the data using a series expansion approach to the form factor of uniform cylinders. The method used is independent of assumptions on the form of the singlet orientational distribution function. Good agreement with the anisotropic two-dimensional SANS patterns is obtained. The results show shear alignment starting at very low shear rates, and the orientational order parameters reach a plateau at higher shear rates with a pseudologarithmic dependence on shear rate. The most probable distribution functions correspond to fibrils parallel to the flow direction under shear, but a sample at rest shows a bimodal distribution with some of the rodlike peptide fibrils oriented perpendicular to the flow direction.
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Jun 2008
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