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Abstract: Two styrene-isoprene-styrene block copolymers Vector 4111 and 4113, exhibiting cylindrical (18 wt % PS) and spherical (16 wt % PS) morphology, respectively, have been examined under uniaxial elongation up to 200% strain. On the basis of stress-strain data, mechanical properties are compared for isotropic and oriented polystyrene domains. The structure at various stages of deformation has been determined from SAXS patterns in three planes and two principal deformation directions with respect to orientation. Samples showed a very high degree of hexagonal packing, resulting in an X-ray pattern taken parallel to the cylinder alignment approaching single crystal ordering. Cylinders were aligned with the closest packed planes parallel to film surface. Particular attention has been paid to a lattice deformation process occurring during the first stretching and relaxation cycle. For a copolymer with oriented cylindrical morphology the deformation was affine up to 120% strain. The microdomain spacing was calculated parallel and perpendicular to the stretching direction. The cylindrical microstructure orientation, quantified by Hermans' orientation factor reduced during elongation of oriented polymer, while the elongation of isotropic sample caused an increase of orientation. Deformation of all studied morphologies was reversible.
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Jun 2009
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Abstract: Experimental and computational searches for the crystal structures of the five commercially available isomers of dichloronitrobenzene and 3,4-dinitrochlorobenzene were performed to assess the relationship between functional group interactions and steric requirements in determining the solid forms. Experimentally, this resulted in the first crystal structure determination of 2,4-dichloronitrobenzene, two solvates of 3,4-dichloronitrobenzene and one of 3,4-dinitrochlorobenzene. Additionally, low temperature redeterminations of the crystal structures were obtained for 2,5-dichloronitrobenzene, 3,4-dichloronitrobenzene, and both the ?- and ?-forms of 3,4-dinitrochlorobenzene. The searches for energetically feasible structures of each of these compounds showed a wide variety of distributions leading to varying degrees of clarity of prediction of the solid state behavior. These range from 2,3-dichloronitrobenzene, which only adopts the crystal structure that was clearly the most thermodynamically stable of all five isomers, through complex systems, which show a range of low energy minima indicating possible polymorphism and solvate formation, to 2,4-dichloronitrobenzene, which can conformationally distort and adopts a complicated Z? = 2 crystal structure.
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Jan 2008
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Abstract: Hendra virus is a negative-sense single-stranded RNA virus within the Paramyxoviridae family which, together with Nipah virus, forms the Henipavirus genus. Infection with bat-borne Hendra virus leads to a disease with high mortality rates in humans. We determined the crystal structure of the unliganded six-bladed beta-propeller domain and compared it to the previously reported structure of Hendra virus attachment glycoprotein (HeV-G) in complex with its cellular receptor, ephrin-B2. As observed for the related unliganded Nipah virus structure, there is plasticity in the Glu579-Pro590 and Lys236-Ala245 ephrin-binding loops prior to receptor engagement. These data reveal that henipaviral attachment glycoproteins undergo common structural transitions upon receptor binding and further define the structural template for antihenipaviral drug design. Our analysis also provides experimental evidence for a dimeric arrangement of HeV-G that exhibits striking similarity to those observed in crystal structures of related paramyxovirus receptor-binding glycoproteins. The biological relevance of this dimer is further supported by the positional analysis of glycosylation sites from across the paramyxoviruses. In HeV-G, the sites lie away from the putative dimer interface and remain accessible to alpha-mannosidase processing on oligomerization. We therefore propose that the overall mode of dimer assembly is conserved for all paramyxoviruses; however, while the geometry of dimerization is rather closely similar for those viruses that bind flexible glycan receptors, significant (up to 60) and different reconfigurations of the subunit packing (associated with a significant decrease in the size of the dimer interface) have accompanied the independent switching to high-affinity protein receptor binding in Hendra and measles viruses.
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Jan 2010
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Abstract: The polydentate ligand 2,4,6-tris(dipyridin-2-ylamino)-1,3,5-triazine (dpyatriz) in combination with the Cu(ClO4)2/CuX2 salt mixtures (X? = Cl?, Br?, or N3?) leads to the formation of molecular coordination aggregates with formulas [Cu3Cl3(dpyatriz)2](ClO4)3 (2), [Cu3Br3(dpyatriz)2](ClO4)3 (3), and [Cu4(N3)4(dpyatriz)2(DMF)4(ClO4)2](ClO4)2 (4). These complexes consist of two dpyatriz ligands bridged via coordination to CuII and disposed either face-to-face in an eclipsed manner (2 and 3) or parallel and mutually shifted in one direction. The copper ions complete their coordination positions with Cl? (2), Br? (3), or N3?, ClO4?, and N,N-dimethylformamide (DMF) (4) ligands. All complexes crystallize together with noncoordinate ClO4? groups that display anion···? interactions with the triazine rings. These interactions have been studied by means of high level ab initio calculations and the MIPp partition scheme. These calculations have proven the ClO4?···[C3N3] interactions to be favorable and have revealed a synergistic effect from the combined occurrence of ??? stacking of triazine rings and the interaction of these moieties with perchlorate ions, as observed in the experimental systems.
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May 2008
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Abstract: Cardiovascular stents are commonly made from 316L stainless steel and are deployed within stenosed arterial lesions using balloon expansion. Deployment involves inflating the balloon and plastically deforming the stent until the required diameter is obtained. This plastic deformation induces static stresses in the stent, which will remain for the lifetime of the device. In order to determine these stresses, finite element models of the unit cells of geometrically different, commercially available balloon expandable stents have been created, and deployment and elastic recoil have been simulated. In this work the residual stresses associated with deployment and recoil are compared for the various stent geometries, with a view to establishing appropriate initial stress states for fatigue loading for the stents. The maximum, minimum, and mean stresses induced in the stent due to systolic/diastolic pressure are evaluated, as are performance measures such as radial and longitudinal recoil.
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Apr 2007
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Abstract: LysR-type transcriptional regulators (LTTRs) form the largest family of bacterial regulators acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes. The LTTR, CrgA, from the human pathogen Neisseria meningitidis, is upregulated during bacterial-host cell contact. Here, we report the crystal structures of both regulatory domain and full-length CrgA, the first of a novel subclass of LTTRs that form octameric rings. Non-denaturing mass spectrometry analysis and analytical ultracentrifugation established that the octameric form of CrgA is the predominant species in solution in both the presence and absence of an oligonucleotide encompassing the CrgA-binding sequence. Furthermore, analysis of the isolated CrgA-DNA complex by mass spectrometry showed stabilization of a double octamer species upon DNA binding. Based on the observed structure and the mass spectrometry findings, a model is proposed in which a hexadecameric array of two CrgA oligomers binds to its DNA target site.
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Jan 2009
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Anton
Barty
,
Sébastien
Boutet
,
Michael J.
Bogan
,
Stefan
Hau-riege
,
Stefano
Marchesini
,
Klaus
Sokolowski-tinten
,
Nikola
Stojanovic
,
Raanan
Tobey
,
Henri
Ehrke
,
Andrea
Cavalleri
,
Stefan
Düsterer
,
Matthias
Frank
,
Sasa
Bajt
,
Bruce
Woods
,
Marvin
Seibert
,
Janos
Hajdu
,
Rolf
Treusch
,
Henry N.
Chapman
Abstract: The transient nanoscale dynamics of materials on femtosecond to picosecond timescales is of great interest in the study of condensed phase dynamics such as crack formation, phase separation and nucleation, and rapid fluctuations in the liquid state or in biologically relevant environments. The ability to take images in a single shot is the key to studying non-repetitive behaviour mechanisms, a capability that is of great importance in many of these problems. Using coherent diffraction imaging with femtosecond X-ray free-electron-laser pulses we capture time-series snapshots of a solid as it evolves on the ultrafast timescale. Artificial structures imprinted on a Si3N4 window are excited with an optical laser and undergo laser ablation, which is imaged with a spatial resolution of 50 nm and a temporal resolution of 10 ps. By using the shortest available free-electron-laser wavelengths1 and proven synchronization methods2 this technique could be extended to spatial resolutions of a few nanometres and temporal resolutions of a few tens of femtoseconds. This experiment opens the door to a new regime of time-resolved experiments in mesoscopic dynamics.
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Jun 2008
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Abstract: We performed a combined theoretical and experimental investigation of the orbital magnetism and magnetocrystalline anisotropy of isolated Co and Fe adatoms on Pd(111) and Rh(111). Theoretical calculations of the spin and orbital moments are based on ab initio spin-polarized density-functional theory (DFT) including a self-consistent treatment of spin-orbit coupling. The calculations use a slab model to represent the adsorbate/substrate complex and allow for a complete structural relaxation leading to a strong inward displacement of the adatom and modest vertical and lateral relaxations in the substrate atoms. Compared to an idealized geometry where the atoms are kept on bulk lattice positions up to the surface, relaxation leads to a much stronger adatom/ligand hybridization. This is also reflected in the results for orbital moments and magnetocrystalline anisotropy energy (MAE). The enhanced hybridization leads to strong quenching of the adatom orbital moments but also to the formation of large induced spin and orbital moments in the substrate. As a consequence, we find that the substrate contribution to the MAE is much more important than estimated before on the basis of studies using an idealized geometry. We also find the surprising result that the MAE strongly depends on the adsorption site. The magnitude and even the sign of the MAE change for adatoms on face-centered cubic with respect to the ones on hexagonal close-packed hollow sites on the (111) surface. The dependence of the MAE on the combination of adatom and substrate has been analyzed in terms of the electronic structure, leading to a sound physical picture of the origin of the MAE. A fundamental problem, however, is the correct prediction of the size of the orbital moments of the adatoms. We suggest that this problem can be solved only via post-DFT corrections introducing an orbital dependence of the exchange potential. The theoretical results are compared to site-averaged, element-specific x-ray magnetic circular dichroism (XMCD) measurements. Low-temperature XMCD spectra and magnetization curves reveal weak out-of-plane anisotropy for Fe adatoms on both substrates. Interestingly, Co adatoms on Rh(111) present in-plane anisotropy with MAE of about -0.6 meV, contrary to the known out-of-plane anisotropy of Co on Pd(111) and Pt(111). The orbital to spin magnetic-moment ratio measured by XMCD shows that the Co adatoms present much stronger orbital magnetization components compared to Fe. The connection between orbital moments and MAE is discussed at the theoretical level including the contribution of the induced substrate magnetization.
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Mar 2010
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Abstract: The present paper details the synthesis, characterization, and preliminary physical analyses of a series of polyisobutylene derivatives featuring urethane and urea end-groups that enable supramolecular network formation to occur via hydrogen bonding. These polymers are readily accessible from relatively inexpensive and commercially available starting materials using a simple two-step synthetic approach. In the bulk, these supramolecular networks were found to possess thermoreversible and elastomeric characteristics as determined by temperature-dependent rheological analysis. These thermoreversible and elastomeric properties make these supramolecular materials potentially very useful in applications such as adhesives and healable surface coatings.
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Feb 2009
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Abstract: The high-pressure evolution of the cubic perovskite NH4MnCl3 has been studied in the 0-6 GPa range by angle-dispersive x-ray diffraction. A structural phase transition has been found at low pressure (P-C= 0.4 GPa), in agreement with previous reports. The high-pressure phase has been refined in the tetragonal P4/mbm and orthorhombic Pbnm space groups. In either case, the structure can be described in terms of a tilted perovskite model (one tilt a(0)a(0)c(+) and two tilts a(+)b(-)b(-), respectively). The average tilting under pressure has been estimated from the lattice parameters. The P-V relation has been fitted by a Murnaghan Equation-of-State with K-0=29(2) GPa and K-0'=9(1).
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Mar 2010
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