B21-High Throughput SAXS
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Abstract: Actin capping proteins belong to the core set of proteins minimally required for actin-based motility and are present in virtually all eukaryotic cells. They bind to the fast-growing barbed end of an actin filament, preventing addition and loss of monomers, thus restricting growth to the slow-growing pointed end. Actin capping proteins are usually heterodimers of two subunits. The Plasmodium orthologs are an exception, as their α subunits are able to form homodimers. We show here that, while the β subunit alone is unstable, the α subunit of the Plasmodium actin capping protein forms functional homo- and heterodimers. This implies independent functions for the αα homo- and αβ heterodimers in certain stages of the parasite life cycle. Structurally, the homodimers resemble canonical αβ heterodimers, although certain rearrangements at the interface must be required. Both homo- and heterodimers bind to actin filaments in a roughly equimolar ratio, indicating they may also bind other sites than barbed ends.
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Mar 2020
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I15-Extreme Conditions
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Diamond Proposal Number(s):
[19339]
Open Access
Abstract: A new diamond-anvil cell apparatus for in situ synchrotron X-ray diffraction measurements of liquids and glasses, at pressures from ambient to 5 GPa and temperatures from ambient to 1300 K, is reported. This portable setup enables in situ monitoring of the melting of complex compounds and the determination of the structure and properties of melts under moderately high pressure and high temperature conditions relevant to industrial processes and magmatic processes in the Earth's crust and shallow mantle. The device was constructed according to a modified Bassett-type hydrothermal diamond-anvil cell design with a large angular opening (θ = 95°). This paper reports the successful application of this device to record in situ synchrotron X-ray diffraction of liquid Ga and synthetic PbSiO3 glass to 1100 K and 3 GPa.
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Mar 2020
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I12-JEEP: Joint Engineering, Environmental and Processing
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Diamond Proposal Number(s):
[16188]
Abstract: Glass foams are attractive thermal insulation materials, thus, the thermal conductivity (λ) is crucial for their performance. Understanding the foaming process is critical for process optimization. Here, we applied high-speed synchrotron X-ray tomography to investigate the change in pore structure during the foaming process, quantifying the foam structures and porosity dynamically. The results can provide guidance for the manufacturing of glass foams. The 3D pore structures were also used to computationally determine λ of glass foams. We used the simulated λ to develop a new analytical model to predict the porosity dependence of λ. The λ values predicted by the new model are in excellent agreement with the experimental data collected from the literature, with an average error of only 0.7%, which performs better than previously proposed models.
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Mar 2020
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B21-High Throughput SAXS
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Diamond Proposal Number(s):
[16235]
Open Access
Abstract: Viscoelastic fluids whose rheological properties are tunable with light have the potential to deliver significant impact in fields relying on a change in flow behavior, such as in-use tuning of combined efficient heat-transfer and drag-reduction agents, microfluidic flow and controlled encapsulation and release. However, simple, single-component systems must be developed to allow integration with these applications. Here, we report a single-component viscoelastic fluid, capable of a dramatic light-sensitive rheological response, from a neutral azobenzene photosurfactant, 4-hexyl-4′butyloxymonotetraethylene glycol (C6AzoOC4E4) in water. From cryo-transmission electron microscopy (TEM), small-angle X-ray scattering (SAXS) and rheology measurements, we observe that the photosurfactant forms an entangled network of wormlike micelles in water, with a high viscosity (28 Pa s) and viscoelastic behaviour. UV irradiation of the surfactant solution creates a less dense micellar network, with some vesicle formation. As a result, the solution viscosity is reduced by four orders of magnitude (to 1.2 × 10−3 Pa s). This process is reversible and the high and low viscosity states can be cycled several times, through alternating UV and blue light irradiation.
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Mar 2020
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B21-High Throughput SAXS
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Diamond Proposal Number(s):
[24748]
Open Access
Abstract: Development of affordable thermal energy storage (TES) has been hampered by the lack of environmentally benign and scalable phase-change materials (PCM). Here we show size-controlled colloidal synthesis of fatty acid-lignin hybrid nanocapsules and demonstrate their applicability as PCM in dry and wet states. The one-pot fabrication allowed for facile preparation of hybrid capsules with a predictable concentration of tall oil fatty acid, oleic acid, or lauric acid in core-shell particles stabilized by softwood kraft lignin. Phase-change peaks of capsules containing 40 wt-% of lauric acid were observed in aqueous dispersion, indicating a possibility to develop colloidal TES systems. In dry form, the hybrid capsules prevented fragmentation of the phase-change peaks during 290 heating-cooling cycles, while in wet state the capsules appeared stable for 25 cycles. The nanoscaled morphology of the capsules was characterized using thermoporometry-differential scanning calorimetry (tp-DSC), transmission electron microscopy (TEM), atomic force microscopy (AFM), dynamic light scattering (DLS), and small angle X-ray scattering (SAXS). Extraction of lauric acid from the capsules allowed for investigation of the intraparticle space previously occupied by the fatty acid. The fatty acid-deficient nanocapsules were found to contain an internal volume that was 19 times as high as that of lignin nanoparticles. Approximately 20 nm thick lignin shells of the capsules were found to be readily accessible to water, permitting heat transfer across the capsules. The possibility to tailor the hybrid capsules by altering the chain length and saturation degree of the fatty acids opens applications that extend beyond the TES systems.
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Mar 2020
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I03-Macromolecular Crystallography
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Diamond Proposal Number(s):
[12718]
Abstract: Trypanosoma are blood-borne parasites and are the causative agents of neglected tropical diseases (NTDs) affecting both humans and animals. These parasites mainly rely on glycolysis for their energy production within the mammalian host, which is why trypanosomal glycolytic enzymes have been pursued as interesting targets for the development of trypanocidal drugs. The structure–function relationships of pyruvate kinases (PYKs) from trypanosomatids (Trypanosoma and Leishmania) have been well-studied within this context. In this paper, we describe the structural and enzymatic characterization of PYK from T. congolense (TcoPYK), the main causative agent of Animal African Trypanosomosis (AAT), by employing a combination of enzymatic assays, thermal unfolding studies and X-ray crystallography.
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Mar 2020
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I03-Macromolecular Crystallography
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Jerome
Fortin
,
Ruxiao
Tian
,
Ida
Zarrabi
,
Graham
Hill
,
Eleanor
Williams
,
Gonzalo
Sanchez-duffhues
,
Midory
Thorikay
,
Parameswaran
Ramachandran
,
Robert
Siddaway
,
Jong Fu
Wong
,
Annette
Wu
,
Lorraine N.
Apuzzo
,
Jillian
Haight
,
Annick
You-ten
,
Bryan E.
Snow
,
Andrew
Wakeham
,
David J.
Goldhamer
,
Daniel
Schramek
,
Alex N.
Bullock
,
Peter Ten
Dijke
,
Cynthia
Hawkins
,
Tak W.
Mak
Diamond Proposal Number(s):
[15433]
Abstract: Diffuse intrinsic pontine gliomas (DIPGs) are aggressive pediatric brain tumors for which there is currently no effective treatment. Some of these tumors combine gain-of-function mutations in ACVR1, PIK3CA, and histone H3-encoding genes. The oncogenic mechanisms of action of ACVR1 mutations are currently unknown. Using mouse models, we demonstrate that Acvr1 G328V arrests the differentiation of oligodendroglial lineage cells, and cooperates with Hist1h3b K27M and Pik3ca H1047R to generate high-grade diffuse gliomas. Mechanistically, Acvr1 G328V upregulates transcription factors which control differentiation and DIPG cell fitness. Furthermore, we characterize E6201 as a dual inhibitor of ACVR1 and MEK1/2, and demonstrate its efficacy toward tumor cells in vivo. Collectively, our results describe an oncogenic mechanism of action for ACVR1 mutations, and suggest therapeutic strategies for DIPGs.
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Mar 2020
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Open Access
Abstract: We report the catalytic asymmetric synthesis of Tafluprost (1), a prostaglandin analogue. This synthesis demonstrates a new approach to prostaglandins involving symmetrization and desymmetrization of a racemic precursor to control the absolute and relative stereochemistry of the cyclopentyl core. Key steps include a diastereo- and enantioselective Rh-catalyzed Suzuki–Miyaura reaction of a racemic bicyclic allyl chloride and an alkenyl boronic acid and a regio- and diastereoselective Pd-catalyzed Tsuji–Trost reaction with an enolate surrogate.
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Mar 2020
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I04-Macromolecular Crystallography
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Diamond Proposal Number(s):
[14794]
Abstract: Degradation of fatty acids by the β-oxidation pathway results in the formation of acetyl-CoA which enters the TCA cycle for the production of ATP. In E. coli, the last three steps of the β-oxidation are catalyzed by two heterotetrameric α2β2 enzymes namely the aerobic trifunctional enzyme (EcTFE) and the anaerobic TFE (anEcTFE). The α-subunit of TFE has 2E-enoyl-CoA hydratase (ECH) and 3S-hydroxyacyl-CoA dehydrogenase (HAD) activities whereas the β-subunit is a thiolase with 3-ketoacyl-CoA thiolase (KAT) activity. Recently, it has been shown that the two TFEs have complementary substrate specificities allowing for the complete degradation of long chain fatty acyl-CoAs into acetyl-CoA under aerobic conditions. Also, it has been shown that the tetrameric EcTFE and anEcTFE assemblies are similar to the TFEs of Pseudomans fragi and human, respectively. Here the properties of the EcTFE subunits are further characterized. Strikingly, it is observed that when expressed separately, EcTFE-α is a catalytically active monomer whereas EcTFE-β is inactive. However, when mixed together active EcTFE tetramer is reconstituted. The crystal structure of the EcTFE-α chain is also reported, complexed with ATP, bound in its HAD active site. Structural comparisons show that the EcTFE hydratase active site has a relatively small fatty acyl tail binding pocket when compared to other TFEs in good agreement with its preferred specificity for short chain 2E-enoyl-CoA substrates. Furthermore, it is observed that millimolar concentrations of ATP destabilize the EcTFE complex, and this may have implications for the ATP-mediated regulation of β-oxidation in E. coli.
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Mar 2020
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I22-Small angle scattering & Diffraction
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Diamond Proposal Number(s):
[16256]
Abstract: CaSO4 minerals (i.e. gypsum, anhydrite and bassanite) are widespread in natural and industrial environments. During the last several years, a number of studies have revealed that nucleation in the CaSO4-H2O system is non-classical, where the formation of crystalline phases involves several steps. Based on these recent insights we have formulated a tentative general model for calcium sulfate precipitation from solution. This model involves primary species that are formed through the assembly of multiple Ca2+ and SO42- ions into nanoclusters. These nanoclusters assemble into poorly ordered (i.e. amorphous) hydrated aggregates, which in turn undergo ordering into coherent crystalline units. The thermodynamic (meta)stability of any of the three CaSO4 phases is regulated by temperature, pressure and ionic strength with gypsum being the stable form at low temperatures and low to medium ionic strengths, and anhydrite the stable phase at high temperatures and lower temperature at high salinities. Bassanite is metastable across the entire phase diagram but readily forms as the primary phase at high ionic strengths across a wide range of temperatures, and can persist up to several months. Although the physicochemical conditions leading to bassanite formation in aqueous systems are relatively well established, nanoscale insights into the nucleation mechanisms and pathways are still lacking. To fill this gap, and to further improve our general model for calcium sulfate precipitation, we conducted in situ scattering measurements at small- and wide-angles (SAXS/WAXS) and complemented these with in situ Raman spectroscopic characterization. Based on these experiments we show that the process of formation of bassanite from aqueous solutions is very similar to the formation of gypsum: it involves the aggregation of small primary species into larger disordered aggregates, only from which the crystalline phase develops. These data thus confirm our general model of CaSO4 nucleation and provide clues to explain the abundant occurrence of bassanite on the surface of Mars (and not on the surface of Earth).
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Mar 2020
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