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Abstract: Hematite nanoparticles were synthesized with U(VI) in circumneutral water through a coprecipitation and hydrothermal treatment process. XRD, TEM, and EXAFS analyses reveal that uranium may aggregate along grain boundaries and occupy Fe sites within hematite. The described synthesis method produces crystalline, single-phase iron oxide nanoparticles absent of surface-bound uranyl complexes. EXAFS data were comparable to spectra from existing studies whose syntheses were more representative of naturally occurring, extended aging processes. This work provides and validates an accelerated method of synthesizing uranium-immobilized iron oxide nanoparticles for further mechanistic studies. High temperature oxide melt solution calorimetry measurements were performed to calculate the thermodynamic stability of uranium-incorporated iron oxide nanoparticles. Increasing uranium content within hematite resulted in more positive formation enthalpies. Standard formation enthalpies of UxFe2–2xO3 were as high as 76.88 ± 2.83 kJ/mol relative to their binary oxides, or -764.04 ± 3.74 kJ/mol relative to their constituent elements, at x = 0.037. Data on the thermodynamic stability of uranium retention pathways may assist in predicting waste uranyl remobilization, as well as in developing more effective methods to retain uranium captured from aqueous environments.

Open Access

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Abstract: Picornavirus family members cause disease in humans. Human rhinoviruses (RV), the main causative agents of the common cold, increase the severity of asthma and COPD; hence, effective agents against RVs are required. The 2A proteinase (2Apro), found in all enteroviruses, represents an attractive target; inactivating mutations in poliovirus 2Apro result in an extension of the VP1 protein preventing infectious virion assembly. Variations in sequence and substrate specificity on eIF4G isoforms between RV 2Apro of genetic groups A and B hinder 2Apro as drug targets. Here, we demonstrate that although RV-A2 and RV-B4 2Apro cleave the substrate GAB1 at different sites, the 2Apro from both groups cleave equally efficiently an artificial site containing P1 methionine. We determined the RV-A2 2Apro structure complexed with zVAM.fmk, containing P1 methionine. Analysis of this first 2Apro-inhibitor complex reveals a conserved hydrophobic P4 pocket among enteroviral 2Apro as a potential target for broad-spectrum anti-enteroviral inhibitors.

Open Access

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Abstract: Bacteria use adaptive CRISPR-Cas immune mechanisms to protect from invasion by bacteriophages and other mobile genetic elements. In response, bacteriophages and mobile genetic elements have co-evolved anti-CRISPR proteins to inhibit the bacterial defense. We and others have previously shown that anti-CRISPR associated (Aca) proteins can regulate this anti-CRISPR counter-attack. Here, we report the first structure of an Aca protein, the Aca2 DNA-binding transcriptional autorepressor from Pectobacterium carotovorum bacteriophage ZF40, determined to 1.34 Å. Aca2 presents a conserved N-terminal helix-turn-helix DNA-binding domain and a previously uncharacterized C-terminal dimerization domain. Dimerization positions the Aca2 recognition helices for insertion into the major grooves of target DNA, supporting its role in regulating anti-CRISPRs. Furthermore, database comparisons identified uncharacterized Aca2 structural homologs in pathogenic bacteria, suggesting that Aca2 represents the first characterized member of a more widespread family of transcriptional regulators.

Open Access

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Abstract: Talin is a mechanosensitive adapter protein that couples integrins to the cytoskeleton. Talin rod domain–containing protein 1 (TLNRD1) shares 22% homology with the talin R7R8 rod domains, and is highly conserved throughout vertebrate evolution, although little is known about its function. Here we show that TLNRD1 is an α-helical protein structurally homologous to talin R7R8. Like talin R7R8, TLNRD1 binds F-actin, but because it forms a novel antiparallel dimer, it also bundles F-actin. In addition, it binds the same LD motif–containing proteins, RIAM and KANK, as talin R7R8. In cells, TLNRD1 localizes to actin bundles as well as to filopodia. Increasing TLNRD1 expression enhances filopodia formation and cell migration on 2D substrates, while TLNRD1 down-regulation has the opposite effect. Together, our results suggest that TLNRD1 has retained the diverse interactions of talin R7R8, but has developed distinct functionality as an actin-bundling protein that promotes filopodia assembly.

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Abstract: Glauconite is an authigenic, iron-rich clay mineral that is abundant in greensands formations worldwide. Evidence from these formations suggests that glauconite is commonly diagenetically converted to carbonate minerals such as siderite, ankerite, and ferroan dolomite. This process represents a natural CO2 sink that may provide an effective mechanism for the engineered mineralization of anthropogenic CO2. To evaluate glauconite carbonation reactions and improve our understanding of glauconite diagenesis, we performed a detailed evaluation of the mechanisms through which carbonate minerals naturally replace glauconite during diagenesis of glauconitic sandstones from the Lower Cretaceous Upper Mannville Group in western Alberta, Canada. Using a combination of optical microscopy and scanning electron imaging, electron microprobe and bulk geochemical analyses, and X-ray fluorescence mapping, we show glauconite carbonation in the Mannville group is an reduction-facilitated, coupled glauconite recrystallization and siderite precipitation reaction. X-ray absorption near-edge spectroscopic mapping and spot analyses demonstrate that this reaction is accompanied by a significant shift in the oxidation state of Fe, from dominantly oxidized in glauconite to reduced in carbonate reaction products. Together, these results suggest that geochemical conditions - most importantly, temperature, partial pressure of CO2, and fluid redox state - were thermodynamically favorable for glauconite carbonation during burial diagenesis of Mannville Group sandstones. Results of thermodynamic models illustrate that, although K-feldspar is favored to precipitate during reductive glauconite dissolution and accompanying Fe-carbonate precipitation, its precipitation is likely kinetically limited, and that an Fe-impoverished glauconite is expected to recrystallize instead. Our findings show that glauconite carbonation is likely a common phenomenon in the subsurface, and thus that glauconite is potentially a significant cation source for mineralizing anthropogenic CO2.