I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[15475, 15215, 12700]
Open Access
Abstract: The agricultural soils of West Limerick, Ireland, contain very localised, extremely high natural Se concentrations that reach levels that are very toxic to grazing livestock. The Carboniferous shales that formed in anoxic deep-water marine environments are the source of the selenium, which, along with the other redox-sensitive elements of molybdenum, uranium, arsenic and vanadium, were mobilised and reprecipitated in post-glacial anoxic marshes. The result has been a history of selenosis and molybdenosis in livestock in this important dairy province. Soils collected at 10–20 cm from five different agricultural sites were analysed, and all yielded concentrations greatly in excess of the safe Se limits of 3–10 mg kg−1; the highest value recorded was 1265.8 mg kg−1 Se. The highest recorded value for Mo in these soils was 1627.5 mg kg−1, and for U, 658.8 mg kg−1. There was a positive correlation between Se, Mo U and organic matter in the soils. Analysis of non-accumulator pasture grasses (Lolium perenne (perennial ryegrass), Festuca arundinacea (tall fescue), Dactylis glomerata (cocksfoot) and Phleum pretense (timothy grass)) revealed the shoot/leaf to contain up to 78.05 mg kg−1 Se while Trifolium repens (white clover) leaves contained 296.15 mg kg−1 Se. An in situ growing experiment using the Se accumulator species Brassica oleracea revealed 971.2 mg kg−1 Se in the leaves of premier kale, which also contained 1000.4 mg kg−1 Mo. Translocation factors (TFs) were generally higher for Mo than Se across all plant species. Combined X-ray absorption near edge spectroscopy (XANES) with micro-X-ray fluorescence (μ-XRF) showed the Se was present in the soil predominantly as the reduced immobile phase, elemental Se (Se0), but also as bioavailable organoselenium species, mainly selenomethionine (SeMet). SeMet was also the main species identified within both the Se non-accumulator and Se accumulator plants. The Se soil–plant system in West Limerick is dominated by SeMet, and uptake into the cattle pasture results in selenosis in the grazing dairy herds. The hyperaccumulating Brassica oleracea species could be used to extract both the Se and Mo to reduce the toxicity of the blighted fields.
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Mar 2023
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I06-Nanoscience
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Diamond Proposal Number(s):
[838]
Abstract: Biogenic nanoscale vanadium magnetite is produced by converting V(V)- bearing ferrihydrites through reductive transformation using the metal- reducing bacterium Geobacter sulfurreducens. With increasing vanadium in the ferrihydrite, the amount of V-doped magnetite produced decreased due to V-toxicity which interrupted the reduction pathway ferrihydrite – magnetite, resulting in siderite or goethite formation. Fe L2,3 and V L2,3 X-ray absorption spectra and data from X-ray magnetic circular dichroism analysis revealed the magnetite to contain the V in the Fe(III) Oh site, predominately as V(III) but always with a component of V(VI) present a consistent V(IV)/V(III) ratio in the range 0.28 to 0.33. The bacteriogenic production of V-doped magnetite nanoparticles from V-doped ferrihydrite is confirmed and the work reveals that microbial reduction of contaminant V(V) to V(III)/V(IV) in the environment will occur below the Fe-redox boundary where it will be immobilised in biomagnetite nanoparticles.
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Jul 2020
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[9044, 9598]
Open Access
Abstract: A detailed understanding of the mechanisms and effects of radiation damage in phyllosilicate minerals is a necessary component of the evaluation of the safety case for a deep geological disposal facility (GDF) for radioactive waste. Structural and chemical changes induced by α-particle damage will affect these mineral’s performance as a reactive barrier material (both in the near and far-field) over timescales relevant to GDF integrity. In this study, two examples of chlorite group minerals have been irradiated at α-particle doses comparable to those predicted to be experienced by the clay buffer material surrounding high level radioactive waste canisters. Crystallographic aberrations induced by the focused 4He2+ ion beam are revealed via high-resolution, microfocus X-ray diffraction mapping. Interlayer collapse by up to 0.5 Å is prevalent across both macro- and micro-crystalline samples, with the macro-crystalline specimen displaying a breakdown of the phyllosilicate structure into loosely-connected, multi-oriented crystallites displaying variable lattice parameters. The damaged lattice parameters suggest a localised breakdown and collapse of the OH- rich, ‘brucite-like’ interlayer. Microfocus Fe K-edge X-ray absorption spectroscopy illustrates this defect accumulation, manifest as a severe damping of the X-ray absorption edge. Subtle Fe2+/Fe3+ speciation changes are apparent across the damaged structures. A trend towards Fe reduction is evident at depth in the damaged structures at certain doses (8.76 x 1015 alpha particles/ cm2). Interestingly, this reductive trend does not increase with radiation dose, indeed at the maximum dose (1.26 x 1016 alpha particles/ cm2) administered in this study, there is evidence for a slight increase in Fe binding energy, suggesting the development of a depth-dependant redox gradient concurrent with light ion damage. At the doses examined here, these damaged structures are likely highly reactive, as sorption capacity will, to an extent, be largely enhanced by lattice disruption and an increase in available ‘edge’ sites.
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Feb 2019
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B18-Core EXAFS
I10-Beamline for Advanced Dichroism
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Richard
Kimber
,
Edward A.
Lewis
,
Fabio
Parmeggiani
,
Kurt
Smith
,
Heath
Bagshaw
,
Toby
Starborg
,
Nimisha
Joshi
,
Adriana
Figueroa
,
Gerrit
Van Der Laan
,
Giannantonio
Cibin
,
Diego
Gianolio
,
Sarah J.
Haigh
,
Richard A. D.
Pattrick
,
Nicholas J.
Turner
,
Jonathan R.
Lloyd
Diamond Proposal Number(s):
[15476, 16136]
Open Access
Abstract: Copper nanoparticles (Cu-NPs) have a wide range of applications as heterogeneous catalysts. In this study, a novel green biosynthesis route for producing Cu-NPs using the metal-reducing bacterium, Shewanella oneidensis is demonstrated. Thin section transmission electron microscopy shows that the Cu-NPs are predominantly intracellular and present in a typical size range of 20–40 nm. Serial block-face scanning electron microscopy demonstrates the Cu-NPs are well-dispersed across the 3D structure of the cells. X-ray absorption near-edge
spectroscopy and extended X-ray absorption fine-structure spectroscopy analysis show the nanoparticles are Cu(0), however, atomic resolution images and electron energy loss spectroscopy suggest partial oxidation of the surface layer to Cu2O upon exposure to air. The catalytic activity of the Cu-NPs is demonstrated in an archetypal “click chemistry” reaction, generating good yields during azide-alkyne cycloadditions, most likely catalyzed by the Cu(I) surface layer of the nanoparticles. Furthermore, cytochrome deletion mutants suggest a novel metal reduction system is involved in enzymatic Cu(II) reduction and Cu-NP synthesis, which is not dependent on the Mtr pathway commonly used to reduce other high oxidation state metals in this bacterium. This work demonstrates a novel, simple, green biosynthesis method for producing efficient copper nanoparticle catalysts.
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Jan 2018
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Abstract: Synthesis of Ni and Zn substituted nano-greigite, Fe3S4, is achieved from single source diethyldithiocarbamato
precursor compounds, producing particles typically 50–100 nm in diameter with plate-like pseudohexagonal morphologies. Up to 12 wt.% Ni is incorporated into the greigite structure, and there is evidence that Zn is also incorporated but Co is not substituted into the lattice. The Fe L3 X-ray absorption spectra for these materials have a narrow single peak at 707.7 eV and the resulting main X-ray magnetic circular dichroism (XMCD) has the same sign at 708.75 eV. All XMCD spectra also have a broad positive feature at 711 eV, a characteristic of covalent mixing. The greigite XMCD spectra contrast with the three clearly defined XMCD site specific peaks found in the ferrite spinel, magnetite. The Fe L2,3 X-ray absorption spectra and XMCD spectra of the greigite reflect and reveal the high conductivity of greigite and the very strong covalency of the Fe–S bonding. The electron hopping between Fe3+ and Fe2+ on octahedral sites results in an intermediate oxidation state of the Fe in theOh site of Fe2.5+ producing an effective formula
of [Fe3þ "]A-site[2Fe2:5þ #]B-siteS24 ]. The Ni L2,3 X-ray absorption spectra and XMCD reveal substitution on the Oh site with a strongly covalent character and an oxidation state
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Aug 2016
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[9044, 11703, 12064]
Open Access
Abstract: The development of complementary imaging techniques at beamline I18 at Diamond
Light Source (Didcot, UK) to investigate the microstructure of inorganic materials is
described. In particular, the use of X-ray micro-imaging techniques to understand the
effect of alpha radiation on phyllosilicates, and the nature of individual catalytic par-
ticles are reported. Micro X-ray diffraction (
m
XRD) studies of the former materials
have shown structural changes that will affect their adsorption properties, while the
chemistry of the catalyst particles has been investigated using micro X-ray fluorescence,
m
XRD and
m
X-ray absorption near-edge structure mapping. The distribution of a Mo-
promoted Pt nitrobenzene hydrogenation catalyst has shown that some of the Pt pene-
trated to the core of the particle and has the same chemistry as the bulk of the Pt located
on the outside of the particle. The phase distribution in an as-prepared Re-Ti-promoted
Co Fischer-Tropsch catalyst is reported.
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Jun 2016
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[9045]
Open Access
Abstract: Analysis of a radioactive, coated concrete core from the decommissioned, spent nuclear fuel cooling pond at the Hunterston-A nuclear site (UK) has provided a unique opportunity to study radionuclides within a real-world system. The core, obtained from a dividing wall and sampled at the fill level of the pond, exhibited radioactivity (dominantly 137Cs and 90Sr) heterogeneously distributed across both painted faces. Chemical analysis of the core was undertaken using microfocus spectroscopy at Diamond Light Source, UK. Mapping of Sr across the surface coatings using microfocus X-ray fluorescence (μXRF) combined with X-ray absorption spectroscopy showed that Sr was bound to TiO2 particles in paint layers, suggesting an association between TiO2 and radiostrontium. Stable Sr and Cs sorption experiments using concrete coupons were also undertaken to assess their interactions with the bulk concrete in case of a breach in the coating layers. μXRF and scanning electron microscopy showed that Sr was immobilized by the cement phases, whilst at the elevated experimental concentrations, Cs was associated with clay minerals in aggregate. This study provides a crucial insight into poorly understood infrastructural contamination in complex systems and is directly applicable to the UK’s decommissioning efforts.
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May 2016
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B18-Core EXAFS
I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[9044, 9598, 9647]
Open Access
Abstract: A critical radiation damage assessment of the materials that will be present in a Geological
Disposal Facility (GDF) for radioactive waste is a priority for building a safety case. Detailed analysis
of the effects of high-energy
a
-particle damage in phyllosilicates such as mica is a necessity, as these
are model structures for both the clay-based backfill material and the highly sorbent components of a
crystalline host rock. The
a
-radiation stability of biotite mica [general formula:
K(Mg,Fe)3(Al,Si3O10)(F,OH)2
] has been investigated using the 5 MV tandem pelletron at the University of Manchester’s
Dalton Cumbrian Facility (DCF) and both the microfocus spectroscopy (I18) and core X
-ray absorption
spectroscopy (B18) beamlines at Diamond Light Source (U.K.). Microfocus X-ray diffraction
mapping has demonstrated extensive structural aberrations in the mica resulting from controlled exposure
to the focused
4He2+ ion (a-particle) beam. Delivered doses were comparable to
a-particle fluences
expected in the highly active, near-field of a GDF. At doses up to 6.77 displacements per atom (dpa)
in the region of highest particle fluence, biotite mica displays a heterogeneous structural response to
irradiation on a micrometer scale, with sequential dilation and contraction of regions of the structure
perpendicular to the sheets, as well as a general overall contraction of the phyllosilicate layer spacing.
At the peak of ion fluence, the structure collapses under a high point defect density and amorphous
areas are pervasive among altered domains of the original lattice. Such structural alterations are likely
to affect the material’s capacity to sorb and retain escaped radionuclides over long timescales; increased
edge site availability may favor increased sorption while interlayer uptake will likely be reduced due
to collapse. Radiation-induced reduction of structural iron at the region of highest structural damage
across an
a-particle’s track has been demonstrated by Fe
K-edge X-ray absorption near edge spectroscopy (XANES) and local structural disorder has been confirmed by analysis of both potassium
K-edge
XANES and Fe
K-edge extended X-ray absorption fine structure analysis. An infrared absorption study
of deformations in the OH–
stretching region, along with electron probe microanalysis complements
the synchrotron data presented here
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Apr 2016
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I18-Microfocus Spectroscopy
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Diamond Proposal Number(s):
[6208, 9044]
Open Access
Abstract: A detailed understanding of the response of mineral phases to the radiation fields experienced in a geological disposal facility (GDF) is currently poorly constrained. Prolongued ion irradiation has the potential to affect both the physical integrity and oxidation state of materials and therefore may alter a structure's ability to react with radionuclides. Radiohalos (spheres of radiation damage in minerals surrounding radioactive (α-emitting) inclusions) provide useful analogues for studying long term α-particle damage accumulation. In this study, silicate minerals adjacent to Th- and U-rich monazite and zircon were probed for redox changes and long/short range disorder using microfocus X-ray absorption spectroscopy (XAS) and high resolution X-ray diffraction (XRD) at Beamline I18, Diamond Light Source. Fe3+→ Fe2+ reduction has been demonstrated in an amphibole sample containing structural OH− groups – a trend not observed in anhydrous phases such as garnet. Coincident with the findings of Pattrick et al. (2013), the radiolytic breakdown of OH− groups is postulated to liberate Fe3+ reducing electrons. Across all samples, high point defect densities and minor lattice aberrations are apparent adjacent to the radioactive inclusion, demonstrated by micro-XRD.
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Dec 2015
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B18-Core EXAFS
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Diamond Proposal Number(s):
[4941]
Open Access
Abstract: Geological disposal facilities (GDF) are intended to isolate and contain radioactive waste within multiple protective barriers, deep underground, to ensure that no harmful quantities of radioactivity reach the surface environment. The last line of defense in a multi-barrier GDF is the geosphere, where iron is present in the
host rock mineralogy as either Fe(II) or Fe(III), and in groundwater as Fe(II) under reducing conditions. The mobility of risk-driving radionuclides, including uranium and technetium, in the environment is affected
significantly by their valence state. Due to its low redox potential, Fe(II) can mediate reduction of these radionuclides from their oxidized, highly mobile, soluble state to their reduced, insoluble state, preventing them from reaching the biosphere. Here a study of five types of potential host rocks, two granitoids, an andesite, a mudstone and a clay-rich carbonate, is reported. The bulk rocks and their minerals were analysed
for iron content, Fe(II/III) ratio, and for the speciation and fine-grained nature of alteration product minerals that might have important controls on groundwater interaction. Total iron content varies between 0.9% in clays to 5.6% in the andesite. X-ray absorption spectroscopy reveals that Fe in the granitoids and andesite is
predominantly Fe(II), and in mudstones, argillaceous limestone and terrestrial sandstone is predominantly Fe(III). The redox reactivity of the potential host rocks both in the presence and absence of Fe(II)-containing ‘model’ groundwater was investigated using an azo dye as a probe molecule. Reduction rates as determined by reactivity with the azo dye were correlated with the ability of the rocks to uptake Fe(II) from groundwater rather than with initial Fe(II) content. Potential GDF host rocks must be characterized in terms of mineralogy, texture, grain size and bulk geochemistry to assess how they might interact with groundwater. This study highlights the importance of redox reactivity, not just total iron and Fe(II)/(III) ratio, when considering the host rock performance as a barrier material to limit transport of radionuclides from the GDF.
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Dec 2015
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